| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is braE [H]
Identifier: 83310903
GI number: 83310903
Start: 1943065
End: 1944312
Strand: Reverse
Name: braE [H]
Synonym: amb1804
Alternate gene names: 83310903
Gene position: 1944312-1943065 (Counterclockwise)
Preceding gene: 83310904
Following gene: 83310902
Centisome position: 39.14
GC content: 68.43
Gene sequence:
>1248_bases ATGGGGGGCAAGACCGCCCGCGCCCTGGTGGTGGATGCCCTGCTGGGCGGAGTGGTGGCCGCCGCCATGGCCCTGCCCAT GCTGGGCGTGCGGCTGGAGGACGGCTCCACCGGCCTGTCCCTGAGCGGGCGCCTCGACTGGGTGGCCTGGGCCGCCGGCA GCGTGGCGGGCGCCCGGTTGCTGATCGGCCTCCTTCGCCTGGGACTGGCCGGACGCGGTCCCAGCCTTCCCGCCCCGCCG CGCGCCATGATGGTCTATGTGGGCTGGGCCATGGTGGCCTTTGCCCTGATCCTGCCCTTCCTGCCCTTCTCGGGGCGCAA TCTGGTGGACAAGGCCACCCTGGTGCTCATCTACGTCATGCTGGGCTGGGGCCTGAACATCGTGGTGGGGCTGGCCGGGC TGCTGGATCTGGGCTTCGTCGCCTTCTACGCGGTGGGGGCCTATTCCTACGCCCTGCTCAGCCAGACCTTCGGGCTGTCC TTCTGGGTCTGCCTGCCGCTGGCCGGTCTGCTGGCCGCGGCCTTCGGCATGGTGCTGGGCTTTCCGGTGCTGCGCCTGCG CGGCGACTACATCGCCATCGTCACCATGGGATTGGGCGAGATCGTCCGGGTGGTGCTGCAGAACTGGCAAGACGTCACCG GCGGCCCCAACGGCATTTCCGGCATCGAGCGGCCTTCGCTGTTCGGCCTGTCCTTCAAGATGGTACCGCCCGAGGGAAGC CAGACCTTCGCCGAGTTCTTCGGCCTGGACTATTCCGCCGACCACCGGGTGATCTTCCTGTATTTCCTGATCCTGGCCTT GGCGCTGCTGACCAACGTCATCACGTTGCGCATCCGCCGCCTGCCGGTGGGCCGGGCCTGGGAGGCCCTGCGCGAGGACG AGATCGCCTGCCGATCCTTGGGCATCAACCCCACCCTGGTGAAGCTCTCGGCCTTCGCCACGGGGGCCATGTTCGCCGGA TTCGCCGGGTCGTTCTTCGCCACCCGCCAGGGCTTCATCAGCCCGGAAAGCTTCACCTTCATCGAATCGGCGGTGATCCT GGCCATCGTGGTGCTGGGCGGCATGGGCAGCCAGATCGGCATCGTGCTGGCGGCCCTGCTGCTGGTGGGCCTGCCGGAAT GGTTCCGCGAGCTGCAGCAGTTCCGCATGCTGGCCTTCGGCGGCGCCATGGTGCTGATCATGCTGTGGAAGCCCGCCGGC TTGCTGTCGACGCGGGAACCCACCATCCGGCTGGGAGAGGCGAAATGA
Upstream 100 bases:
>100_bases ATCGAATACAAGGATGTGGCCACCTTCAGCATCCTGGTGGCGGTCCTGGTGTTCCGCCCCACCGGCTTGCTGGGCCGCCC CGACGTGGAGAAGATCTGAC
Downstream 100 bases:
>100_bases GCGGCCCCATCCCAACCTGTCATCCCGAGCCCCAGCGAGGGATCTCCGCCTGGCATGGCTTTGTCATGCCGGATCGGGCG GATCAGGACGAGATCCCTCC
Product: ABC-type branched-chain amino acid transport system, permease component
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MGGKTARALVVDALLGGVVAAAMALPMLGVRLEDGSTGLSLSGRLDWVAWAAGSVAGARLLIGLLRLGLAGRGPSLPAPP RAMMVYVGWAMVAFALILPFLPFSGRNLVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFVAFYAVGAYSYALLSQTFGLS FWVCLPLAGLLAAAFGMVLGFPVLRLRGDYIAIVTMGLGEIVRVVLQNWQDVTGGPNGISGIERPSLFGLSFKMVPPEGS QTFAEFFGLDYSADHRVIFLYFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSLGINPTLVKLSAFATGAMFAG FAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGIVLAALLLVGLPEWFRELQQFRMLAFGGAMVLIMLWKPAG LLSTREPTIRLGEAK
Sequences:
>Translated_415_residues MGGKTARALVVDALLGGVVAAAMALPMLGVRLEDGSTGLSLSGRLDWVAWAAGSVAGARLLIGLLRLGLAGRGPSLPAPP RAMMVYVGWAMVAFALILPFLPFSGRNLVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFVAFYAVGAYSYALLSQTFGLS FWVCLPLAGLLAAAFGMVLGFPVLRLRGDYIAIVTMGLGEIVRVVLQNWQDVTGGPNGISGIERPSLFGLSFKMVPPEGS QTFAEFFGLDYSADHRVIFLYFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSLGINPTLVKLSAFATGAMFAG FAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGIVLAALLLVGLPEWFRELQQFRMLAFGGAMVLIMLWKPAG LLSTREPTIRLGEAK >Mature_414_residues GGKTARALVVDALLGGVVAAAMALPMLGVRLEDGSTGLSLSGRLDWVAWAAGSVAGARLLIGLLRLGLAGRGPSLPAPPR AMMVYVGWAMVAFALILPFLPFSGRNLVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFVAFYAVGAYSYALLSQTFGLSF WVCLPLAGLLAAAFGMVLGFPVLRLRGDYIAIVTMGLGEIVRVVLQNWQDVTGGPNGISGIERPSLFGLSFKMVPPEGSQ TFAEFFGLDYSADHRVIFLYFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSLGINPTLVKLSAFATGAMFAGF AGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGIVLAALLLVGLPEWFRELQQFRMLAFGGAMVLIMLWKPAGL LSTREPTIRLGEAK
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=313, Percent_Identity=60.3833865814696, Blast_Score=358, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 44191; Mature: 44060
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGKTARALVVDALLGGVVAAAMALPMLGVRLEDGSTGLSLSGRLDWVAWAAGSVAGARL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCEECCCCCCHHHHHCHHHHHHH LIGLLRLGLAGRGPSLPAPPRAMMVYVGWAMVAFALILPFLPFSGRNLVDKATLVLIYVM HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LGWGLNIVVGLAGLLDLGFVAFYAVGAYSYALLSQTFGLSFWVCLPLAGLLAAAFGMVLG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC FPVLRLRGDYIAIVTMGLGEIVRVVLQNWQDVTGGPNGISGIERPSLFGLSFKMVPPEGS CHHHHCCCCEEEEEECCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCEECEEEEECCCCCH QTFAEFFGLDYSADHRVIFLYFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GINPTLVKLSAFATGAMFAGFAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIG CCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH IVLAALLLVGLPEWFRELQQFRMLAFGGAMVLIMLWKPAGLLSTREPTIRLGEAK HHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure GGKTARALVVDALLGGVVAAAMALPMLGVRLEDGSTGLSLSGRLDWVAWAAGSVAGARL CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCEECCCCCCHHHHHCHHHHHHH LIGLLRLGLAGRGPSLPAPPRAMMVYVGWAMVAFALILPFLPFSGRNLVDKATLVLIYVM HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LGWGLNIVVGLAGLLDLGFVAFYAVGAYSYALLSQTFGLSFWVCLPLAGLLAAAFGMVLG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC FPVLRLRGDYIAIVTMGLGEIVRVVLQNWQDVTGGPNGISGIERPSLFGLSFKMVPPEGS CHHHHCCCCEEEEEECCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCEECEEEEECCCCCH QTFAEFFGLDYSADHRVIFLYFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GINPTLVKLSAFATGAMFAGFAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIG CCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH IVLAALLLVGLPEWFRELQQFRMLAFGGAMVLIMLWKPAGLLSTREPTIRLGEAK HHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]