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The map label for this gene is yrdA [H]

Identifier: 83310891

GI number: 83310891

Start: 1931763

End: 1932281

Strand: Reverse

Name: yrdA [H]

Synonym: amb1792

Alternate gene names: 83310891

Gene position: 1932281-1931763 (Counterclockwise)

Preceding gene: 83310892

Following gene: 83310890

Centisome position: 38.9

GC content: 66.47

Gene sequence:

>519_bases
ATGAGCGGCACCATTCTTCCCTTCGAGGGCACCAGCCCGACCATCGCCCCCGACGTCTTCGTCGCCCCCACCGCCGTGGT
GATCGGCGACACGGTGATCGGCGCCGGGACCTCGGTGTGGTTCAACTGCGTCATCAGGGGCGACGTCCACGAGATCCGCA
TCGGCGAGCGCACCAATATCCAGGACGGCACCGTCATCCACGTCACCGGCGGCAAGCTGGGCACCTATATCGGCTCGGAC
ATCACCATCGGCCATGGCGCCATCCTGCACGCCTGCACCCTGGAAGACGCCTGCTTCGTGGGCATGGGCGCCGTGGTGCT
GGACGGCGTGGTGGTGGAATCGGGCGCCATGGTGGCGGCGGGTGCGGTGGTGACGCCGGGCAAGCGCGTCAAGGCGGGCG
AATTGTGGGGCGGCAATCCGGCCAAGCTGCTGCGCCGCCTGTCCGACGAGGAAATCGCCTTCTTCCCCGTCTCGGCGGAA
AAATACGTCGAACTGGCCGCCAAGTATTTCAAGGCCTAA

Upstream 100 bases:

>100_bases
AAGGGCGCGTCGGGTCAGGCCCTGCAGAACATGAACCTGATGTTCGGCCTGCCGGAGACCACGGCCCTGGCCCAGCAACC
CATGTTCCCGTGAGGACCTT

Downstream 100 bases:

>100_bases
GGCCCGTCATGGCCAAGAAGGGCAAGTCTTCCGGCAATGGTCTGATGACGGCGCTGGCCCGGCCGCTGGCCGCCATCGGG
CGGCTGATGGGCGGCGGCAA

Product: carbonic anhydrase/acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSGTILPFEGTSPTIAPDVFVAPTAVVIGDTVIGAGTSVWFNCVIRGDVHEIRIGERTNIQDGTVIHVTGGKLGTYIGSD
ITIGHGAILHACTLEDACFVGMGAVVLDGVVVESGAMVAAGAVVTPGKRVKAGELWGGNPAKLLRRLSDEEIAFFPVSAE
KYVELAAKYFKA

Sequences:

>Translated_172_residues
MSGTILPFEGTSPTIAPDVFVAPTAVVIGDTVIGAGTSVWFNCVIRGDVHEIRIGERTNIQDGTVIHVTGGKLGTYIGSD
ITIGHGAILHACTLEDACFVGMGAVVLDGVVVESGAMVAAGAVVTPGKRVKAGELWGGNPAKLLRRLSDEEIAFFPVSAE
KYVELAAKYFKA
>Mature_171_residues
SGTILPFEGTSPTIAPDVFVAPTAVVIGDTVIGAGTSVWFNCVIRGDVHEIRIGERTNIQDGTVIHVTGGKLGTYIGSDI
TIGHGAILHACTLEDACFVGMGAVVLDGVVVESGAMVAAGAVVTPGKRVKAGELWGGNPAKLLRRLSDEEIAFFPVSAEK
YVELAAKYFKA

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=42.1348314606742, Blast_Score=146, Evalue=9e-37,
Organism=Escherichia coli, GI1787667, Length=164, Percent_Identity=38.4146341463415, Blast_Score=109, Evalue=8e-26,
Organism=Escherichia coli, GI87081681, Length=161, Percent_Identity=36.6459627329193, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17842; Mature: 17711

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTILPFEGTSPTIAPDVFVAPTAVVIGDTVIGAGTSVWFNCVIRGDVHEIRIGERTNI
CCCCEEEECCCCCCCCCCEEECCEEEEECCEEECCCCEEEEEEEEECCCEEEEECCCCCC
QDGTVIHVTGGKLGTYIGSDITIGHGAILHACTLEDACFVGMGAVVLDGVVVESGAMVAA
CCCEEEEEECCCEEEECCCCEEECCCCEEEEEECCCHHHHCCCHHHHCCEEECCCCEEEC
GAVVTPGKRVKAGELWGGNPAKLLRRLSDEEIAFFPVSAEKYVELAAKYFKA
CEEECCCCCEEECCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGTILPFEGTSPTIAPDVFVAPTAVVIGDTVIGAGTSVWFNCVIRGDVHEIRIGERTNI
CCCEEEECCCCCCCCCCEEECCEEEEECCEEECCCCEEEEEEEEECCCEEEEECCCCCC
QDGTVIHVTGGKLGTYIGSDITIGHGAILHACTLEDACFVGMGAVVLDGVVVESGAMVAA
CCCEEEEEECCCEEEECCCCEEECCCCEEEEEECCCHHHHCCCHHHHCCEEECCCCEEEC
GAVVTPGKRVKAGELWGGNPAKLLRRLSDEEIAFFPVSAEKYVELAAKYFKA
CEEECCCCCEEECCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]