| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310890
Identifier: 83310890
GI number: 83310890
Start: 1930174
End: 1931754
Strand: Reverse
Name: 83310890
Synonym: amb1791
Alternate gene names: NA
Gene position: 1931754-1930174 (Counterclockwise)
Preceding gene: 83310891
Following gene: 83310889
Centisome position: 38.89
GC content: 71.73
Gene sequence:
>1581_bases ATGGCCAAGAAGGGCAAGTCTTCCGGCAATGGTCTGATGACGGCGCTGGCCCGGCCGCTGGCCGCCATCGGGCGGCTGAT GGGCGGCGGCAAGCCGGTCGAAGAGGAAGAGATCGTCCTGCCCGCCGAAGTCTCGTCGTCCTCCCTGGTCGACGATTCCT TCACCATGGCCCTGGAAAGCCTGCTGGCCGAGGATGACGGCCACTTCCAGACCAAGCTGCACCTGATCTCCCTGGTGGAG TTCCACGAGGCGGTGGGCGACAAATGGGCCCGCATCGCCGAGAAGGTGATGCTGATCGCCGAGGGCGTCATCAACCTCCA TCTGGGCGCCGGCAACGTCTATGGCCGCAAGGGCTCGGACCTGTTCGTCCTGCTGTTTCGCAACACCCCTGCCCCTGAGG CGCGGCGGCGCGCCGTGCGCATCGCCCAGGAGCTGGGCACTCGACTGGTGGGCAGCCAGTTCACCGGCCACGACCGCCCC CTGGCCCTGGCGGCGGAAATCTCCCTGGCCGATGCCGTGGCCGGGGATGGCCAGCTGGACCTGGAGGCCCTGGCCGCCGC CGTCACCGAAACCCGGGCGGTGATCGCCGAACAGGCATCGCCACGCGCCCCCATCGCCCCACCCGACGATGCCGCCCCCC GCCGCGACAAGGAGCCGCAATGGGCGGCCATGAATGCGGCCGAACGGGCCAAGGTCGATCCCAATTGGAAAGCCGCCGTG GTGGACGGGGCGGCGCGGACCAAGGCCGACCCCAACTGGCAGCCGGTCGCCACCGAGCGCCCTCCGGCAGAGATCGATCC CGGCCTGGAGGCCACGCCGCCCATGCCGGGCGACGCCGCCCTGTCCATGGTCTGGCGCCCCACCTGGATGGACGAGGGCG AGGTGATCGGCGCCTATCGCGCCCAGGTACTGCGCGTCGACCAGCCCGGCCAGCCGGCCTATGAGGGCTCGCGCGCCTAT CCCGGCCCGGGCGACGAATCCATCCCCCTGATCGACCGCTTCACGGCGGGAGCGGCGGTGCGCGGCATCAAGGCCGCCAT GGCCGATGGCAGCCCGGCCCGCATCATCGTTCCCCTGCACTGGGGATCGCTGGGGACCACCGCCCGCATGTCGGTGCTGG CCCCCTTCGCCGACATCCCCGAGGCGGTCCGCGCCCGGGGGCTGATCATCGACGTGTTCGGCGTGCCGGCCACCCTGTCG CCGGTACCCCTGGCCGAGGCCATCGCCGCCCTCGGCCCGCTCTGCCGCGAAGTCATGGTGCGGGTGCCGCTCAGCAACCC GGCCCTGGCCCGCGCCGCCTCGGCGGGCGCCCGATCCGTCAGCATCGATCTGGCGGAACTGCCCAATGCCGACAAGACCG ATGACGACCACCTGCTGGCCGCCCTCCTCCGGGTGAGGAGCGAGGCGCTGGGCGCCGGACTGGGCGTCAGCGTCTGGGGC GTGCGCCGGCGCAAGGTGGTGGTGGGCACCGTACTGGGCGGCTTTGCCATGATGAACGGGCCGGGCCTGATGAAGGACCT GCCCAAGCCCGCCAAGGTCCTGCCGGCGCCGCGCTCGCGCTTCGCTCCCGCGCCGTCGTGA
Upstream 100 bases:
>100_bases TGCTGCGCCGCCTGTCCGACGAGGAAATCGCCTTCTTCCCCGTCTCGGCGGAAAAATACGTCGAACTGGCCGCCAAGTAT TTCAAGGCCTAAGGCCCGTC
Downstream 100 bases:
>100_bases CGGGCGGCAAGATTGGGGCCGTCCTGTCGCCCCTGGCCATCATCGTCGTCATCAACGGCGCCGTGGGCTGGGCCCTGTTC CGCTGGCAATGGGCCAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MAKKGKSSGNGLMTALARPLAAIGRLMGGGKPVEEEEIVLPAEVSSSSLVDDSFTMALESLLAEDDGHFQTKLHLISLVE FHEAVGDKWARIAEKVMLIAEGVINLHLGAGNVYGRKGSDLFVLLFRNTPAPEARRRAVRIAQELGTRLVGSQFTGHDRP LALAAEISLADAVAGDGQLDLEALAAAVTETRAVIAEQASPRAPIAPPDDAAPRRDKEPQWAAMNAAERAKVDPNWKAAV VDGAARTKADPNWQPVATERPPAEIDPGLEATPPMPGDAALSMVWRPTWMDEGEVIGAYRAQVLRVDQPGQPAYEGSRAY PGPGDESIPLIDRFTAGAAVRGIKAAMADGSPARIIVPLHWGSLGTTARMSVLAPFADIPEAVRARGLIIDVFGVPATLS PVPLAEAIAALGPLCREVMVRVPLSNPALARAASAGARSVSIDLAELPNADKTDDDHLLAALLRVRSEALGAGLGVSVWG VRRRKVVVGTVLGGFAMMNGPGLMKDLPKPAKVLPAPRSRFAPAPS
Sequences:
>Translated_526_residues MAKKGKSSGNGLMTALARPLAAIGRLMGGGKPVEEEEIVLPAEVSSSSLVDDSFTMALESLLAEDDGHFQTKLHLISLVE FHEAVGDKWARIAEKVMLIAEGVINLHLGAGNVYGRKGSDLFVLLFRNTPAPEARRRAVRIAQELGTRLVGSQFTGHDRP LALAAEISLADAVAGDGQLDLEALAAAVTETRAVIAEQASPRAPIAPPDDAAPRRDKEPQWAAMNAAERAKVDPNWKAAV VDGAARTKADPNWQPVATERPPAEIDPGLEATPPMPGDAALSMVWRPTWMDEGEVIGAYRAQVLRVDQPGQPAYEGSRAY PGPGDESIPLIDRFTAGAAVRGIKAAMADGSPARIIVPLHWGSLGTTARMSVLAPFADIPEAVRARGLIIDVFGVPATLS PVPLAEAIAALGPLCREVMVRVPLSNPALARAASAGARSVSIDLAELPNADKTDDDHLLAALLRVRSEALGAGLGVSVWG VRRRKVVVGTVLGGFAMMNGPGLMKDLPKPAKVLPAPRSRFAPAPS >Mature_525_residues AKKGKSSGNGLMTALARPLAAIGRLMGGGKPVEEEEIVLPAEVSSSSLVDDSFTMALESLLAEDDGHFQTKLHLISLVEF HEAVGDKWARIAEKVMLIAEGVINLHLGAGNVYGRKGSDLFVLLFRNTPAPEARRRAVRIAQELGTRLVGSQFTGHDRPL ALAAEISLADAVAGDGQLDLEALAAAVTETRAVIAEQASPRAPIAPPDDAAPRRDKEPQWAAMNAAERAKVDPNWKAAVV DGAARTKADPNWQPVATERPPAEIDPGLEATPPMPGDAALSMVWRPTWMDEGEVIGAYRAQVLRVDQPGQPAYEGSRAYP GPGDESIPLIDRFTAGAAVRGIKAAMADGSPARIIVPLHWGSLGTTARMSVLAPFADIPEAVRARGLIIDVFGVPATLSP VPLAEAIAALGPLCREVMVRVPLSNPALARAASAGARSVSIDLAELPNADKTDDDHLLAALLRVRSEALGAGLGVSVWGV RRRKVVVGTVLGGFAMMNGPGLMKDLPKPAKVLPAPRSRFAPAPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55275; Mature: 55144
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKGKSSGNGLMTALARPLAAIGRLMGGGKPVEEEEIVLPAEVSSSSLVDDSFTMALES CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH LLAEDDGHFQTKLHLISLVEFHEAVGDKWARIAEKVMLIAEGVINLHLGAGNVYGRKGSD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCC LFVLLFRNTPAPEARRRAVRIAQELGTRLVGSQFTGHDRPLALAAEISLADAVAGDGQLD EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCC LEALAAAVTETRAVIAEQASPRAPIAPPDDAAPRRDKEPQWAAMNAAERAKVDPNWKAAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCEEE VDGAARTKADPNWQPVATERPPAEIDPGLEATPPMPGDAALSMVWRPTWMDEGEVIGAYR ECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCEEEEEE AQVLRVDQPGQPAYEGSRAYPGPGDESIPLIDRFTAGAAVRGIKAAMADGSPARIIVPLH EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEE WGSLGTTARMSVLAPFADIPEAVRARGLIIDVFGVPATLSPVPLAEAIAALGPLCREVMV CCCCCCHHHHHHHCCHHHCHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH RVPLSNPALARAASAGARSVSIDLAELPNADKTDDDHLLAALLRVRSEALGAGLGVSVWG CCCCCCCHHHHHHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC VRRRKVVVGTVLGGFAMMNGPGLMKDLPKPAKVLPAPRSRFAPAPS CCCCEEEEEEHHHHHHHCCCCCHHHHCCCCHHHCCCCHHCCCCCCC >Mature Secondary Structure AKKGKSSGNGLMTALARPLAAIGRLMGGGKPVEEEEIVLPAEVSSSSLVDDSFTMALES CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH LLAEDDGHFQTKLHLISLVEFHEAVGDKWARIAEKVMLIAEGVINLHLGAGNVYGRKGSD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCC LFVLLFRNTPAPEARRRAVRIAQELGTRLVGSQFTGHDRPLALAAEISLADAVAGDGQLD EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCC LEALAAAVTETRAVIAEQASPRAPIAPPDDAAPRRDKEPQWAAMNAAERAKVDPNWKAAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCEEE VDGAARTKADPNWQPVATERPPAEIDPGLEATPPMPGDAALSMVWRPTWMDEGEVIGAYR ECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCEEEEEE AQVLRVDQPGQPAYEGSRAYPGPGDESIPLIDRFTAGAAVRGIKAAMADGSPARIIVPLH EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEE WGSLGTTARMSVLAPFADIPEAVRARGLIIDVFGVPATLSPVPLAEAIAALGPLCREVMV CCCCCCHHHHHHHCCHHHCHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH RVPLSNPALARAASAGARSVSIDLAELPNADKTDDDHLLAALLRVRSEALGAGLGVSVWG CCCCCCCHHHHHHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC VRRRKVVVGTVLGGFAMMNGPGLMKDLPKPAKVLPAPRSRFAPAPS CCCCEEEEEEHHHHHHHCCCCCHHHHCCCCHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA