| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83310834
Identifier: 83310834
GI number: 83310834
Start: 1883256
End: 1883840
Strand: Reverse
Name: 83310834
Synonym: amb1735
Alternate gene names: NA
Gene position: 1883840-1883256 (Counterclockwise)
Preceding gene: 83310852
Following gene: 83310833
Centisome position: 37.93
GC content: 69.57
Gene sequence:
>585_bases ATGGCTGCTCAATCTCTTAACACAATGCACCTTTACGGCGCCATGGCGCGCCTGGAAACCGCCACCAAAATCATGGCGCT GATCTCCGACCTTCTCGCCGAACGCCGCGATGGAGAACTCCACCTGACCCACGCGGGGGCGAACGGCCTGTACGACCTGA CGGCCGAATGCAGCCGATCCACCCGCGACCTGCATGACGCCCTCGGGGCCGCGGCGGAGCGGGAGGACAACACCGCCCTG ACCGAGGCTGCCAGCCGCGCCATCTTCGAGCGGGGTTATCGGGAGGGCTATGCGGTTGCCGTCACCGAACCGGGCATTCC CGTCGTCGCAGAGCGGGAATCGGCCCTCGCCTACGGGGTCAAGCTCGGCTTCATGTGCGGCTGGCGGGAGGCGGCCGAGG GCGGCACCAACCGCGCGGCGGCTTGCCAACAGGCGGTGGACGACGCCCTTCGCGTCGCCTTCCGGGCGCCCGGTTCTGAG GAGGAGCGGGTTCCCGAGGCCGCGCCCCCCGGCCCATCCTTGACCGAACCCGTTCCCGACGCGGAACGCGCCGATCTCCA CCCACAGGCCCGGCAGTCGGCGTGA
Upstream 100 bases:
>100_bases ACGCCTTGCGGACTAGGCATTAAACCTAAAAAAGCGGCCCGGTGGGGTGCTGTAACACCGTCACCGAGCCTGACCACAAC CCGATTTGGAGCATCGGCTC
Downstream 100 bases:
>100_bases TCCGGCCAAAGGCAGAGGGGGCGGGCCGATGGTCCGCCCCCTTCGTTCGACAGGGGATATGTCATGGACAAAGGACAGGA CAGCTTCGACCTTTCGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAAQSLNTMHLYGAMARLETATKIMALISDLLAERRDGELHLTHAGANGLYDLTAECSRSTRDLHDALGAAAEREDNTAL TEAASRAIFERGYREGYAVAVTEPGIPVVAERESALAYGVKLGFMCGWREAAEGGTNRAAACQQAVDDALRVAFRAPGSE EERVPEAAPPGPSLTEPVPDAERADLHPQARQSA
Sequences:
>Translated_194_residues MAAQSLNTMHLYGAMARLETATKIMALISDLLAERRDGELHLTHAGANGLYDLTAECSRSTRDLHDALGAAAEREDNTAL TEAASRAIFERGYREGYAVAVTEPGIPVVAERESALAYGVKLGFMCGWREAAEGGTNRAAACQQAVDDALRVAFRAPGSE EERVPEAAPPGPSLTEPVPDAERADLHPQARQSA >Mature_193_residues AAQSLNTMHLYGAMARLETATKIMALISDLLAERRDGELHLTHAGANGLYDLTAECSRSTRDLHDALGAAAEREDNTALT EAASRAIFERGYREGYAVAVTEPGIPVVAERESALAYGVKLGFMCGWREAAEGGTNRAAACQQAVDDALRVAFRAPGSEE ERVPEAAPPGPSLTEPVPDAERADLHPQARQSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20660; Mature: 20529
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQSLNTMHLYGAMARLETATKIMALISDLLAERRDGELHLTHAGANGLYDLTAECSRS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH TRDLHDALGAAAEREDNTALTEAASRAIFERGYREGYAVAVTEPGIPVVAERESALAYGV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHH KLGFMCGWREAAEGGTNRAAACQQAVDDALRVAFRAPGSEEERVPEAAPPGPSLTEPVPD HHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCC AERADLHPQARQSA CCCCCCCCHHHCCC >Mature Secondary Structure AAQSLNTMHLYGAMARLETATKIMALISDLLAERRDGELHLTHAGANGLYDLTAECSRS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH TRDLHDALGAAAEREDNTALTEAASRAIFERGYREGYAVAVTEPGIPVVAERESALAYGV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHH KLGFMCGWREAAEGGTNRAAACQQAVDDALRVAFRAPGSEEERVPEAAPPGPSLTEPVPD HHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCC AERADLHPQARQSA CCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA