Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310833

Identifier: 83310833

GI number: 83310833

Start: 1882611

End: 1883192

Strand: Reverse

Name: 83310833

Synonym: amb1734

Alternate gene names: NA

Gene position: 1883192-1882611 (Counterclockwise)

Preceding gene: 83310834

Following gene: 83310832

Centisome position: 37.91

GC content: 69.59

Gene sequence:

>582_bases
ATGGACAAAGGACAGGACAGCTTCGACCTTTCGGTCACCATCCCGGCGTCAGAACTGGCGCAATTGCGCCGCCGGGTCCT
ATACCTTGAAGCCGCGTTGATCCAGGTCATACGCGACCAACGGCGGATCAAGGAGTGGTTCACCGCCGCCGAGTTGGTGG
CGCTCCGCCTGCCCGGCCTGCCCACCAGCAAGGCGGCAGTCACCCGAATCGCCAGGGAACAGGGATGGACCACGGAAAAG
GTGCCATGCCAGGGCGGGGAGCGGCACGCCTACCACTTCACCAGCCTGCCCCGCCGTGCGTTCCAGGGGCTGATCGACAT
GGTACTGGCGCCCCCGCCCGGCGCCGTCGCCCCCGTTGACCAAGTGCCGGAGCTGCCCGAGCCGGAACCGGCGCCGATGC
CCCCGCCCAACGCGGCGCCCCCGTGGGTGCTCCCCTTGATGCGGATGATCCGCCACCAGGGCGCTGCCAACGTCGCGGAG
GCCATCCGCGAGCTTCCGGCCTTCCTGCCGCCGGGCGTCGCCTGCCCCAGCATGGGAGAGGCCATGGAGGTGCTGCGGGC
GCTGGGCATGGTGGCAAGCTGA

Upstream 100 bases:

>100_bases
CGCCGATCTCCACCCACAGGCCCGGCAGTCGGCGTGATCCGGCCAAAGGCAGAGGGGGCGGGCCGATGGTCCGCCCCCTT
CGTTCGACAGGGGATATGTC

Downstream 100 bases:

>100_bases
GGGGGAAAGGGCACCTTCGCGGACGGCCATCACCCTCTATCGGAAGCGCATTCTGGAGGCGTCGATTTACTGACCGTCCA
TTATGGCGAAATCGGCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MDKGQDSFDLSVTIPASELAQLRRRVLYLEAALIQVIRDQRRIKEWFTAAELVALRLPGLPTSKAAVTRIAREQGWTTEK
VPCQGGERHAYHFTSLPRRAFQGLIDMVLAPPPGAVAPVDQVPELPEPEPAPMPPPNAAPPWVLPLMRMIRHQGAANVAE
AIRELPAFLPPGVACPSMGEAMEVLRALGMVAS

Sequences:

>Translated_193_residues
MDKGQDSFDLSVTIPASELAQLRRRVLYLEAALIQVIRDQRRIKEWFTAAELVALRLPGLPTSKAAVTRIAREQGWTTEK
VPCQGGERHAYHFTSLPRRAFQGLIDMVLAPPPGAVAPVDQVPELPEPEPAPMPPPNAAPPWVLPLMRMIRHQGAANVAE
AIRELPAFLPPGVACPSMGEAMEVLRALGMVAS
>Mature_193_residues
MDKGQDSFDLSVTIPASELAQLRRRVLYLEAALIQVIRDQRRIKEWFTAAELVALRLPGLPTSKAAVTRIAREQGWTTEK
VPCQGGERHAYHFTSLPRRAFQGLIDMVLAPPPGAVAPVDQVPELPEPEPAPMPPPNAAPPWVLPLMRMIRHQGAANVAE
AIRELPAFLPPGVACPSMGEAMEVLRALGMVAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21048; Mature: 21048

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKGQDSFDLSVTIPASELAQLRRRVLYLEAALIQVIRDQRRIKEWFTAAELVALRLPGL
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTSKAAVTRIAREQGWTTEKVPCQGGERHAYHFTSLPRRAFQGLIDMVLAPPPGAVAPVD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QVPELPEPEPAPMPPPNAAPPWVLPLMRMIRHQGAANVAEAIRELPAFLPPGVACPSMGE
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHH
AMEVLRALGMVAS
HHHHHHHHHHCCC
>Mature Secondary Structure
MDKGQDSFDLSVTIPASELAQLRRRVLYLEAALIQVIRDQRRIKEWFTAAELVALRLPGL
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTSKAAVTRIAREQGWTTEKVPCQGGERHAYHFTSLPRRAFQGLIDMVLAPPPGAVAPVD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QVPELPEPEPAPMPPPNAAPPWVLPLMRMIRHQGAANVAEAIRELPAFLPPGVACPSMGE
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHH
AMEVLRALGMVAS
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA