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The map label for this gene is intA [C]

Identifier: 83310823

GI number: 83310823

Start: 1874273

End: 1875064

Strand: Reverse

Name: intA [C]

Synonym: amb1724

Alternate gene names: 83310823

Gene position: 1875064-1874273 (Counterclockwise)

Preceding gene: 83310827

Following gene: 83310810

Centisome position: 37.75

GC content: 58.96

Gene sequence:

>792_bases
GTGTTGAGCAAGGCGCTGAATCTTGCCAAACGCTGGGAATGGATCGCCAAGAATGTGGCCGAGGGCACCCAGATGTACCC
GGAACACCCACGCAAGCGGTATGCAAGTCCCGCCGAACTGGCTCGTGTGCTGGAAGCCATCGCCAACCATCCTCAGCAGG
ATTCCTGCGATGCCATCCGCCTTTTGATCCTTACCGGAGCCCGTAAAGGCGAAGTCTTCACGGCCCGCTGGGAGGATATT
GATCTCGATGCGGGGATTTGGTCGAAGCCCAGCGCCCATACCAAGCAGAACCAGGAGCACATTGCCCCCCTGTCCGGCAC
CGCCATTCAACTCTTAAAGCGGAGAAAGGAAACAGCCGCAGGACAATGGGTCTTTCCGGGCAGGGTCTCGTCGGATGAGC
ATATCACCGACGTCAAGAAGACCTGGGATGCCTGCCGAAAGGCAGCCACCTTGGCGCTGTGGCGCGAGAGCCCATCCATC
GCCGCCATCATTGACGGATTACACGCCGACCTCAAGCGAGCCCCGACTATCGAGGAAATCCAGGCGGCCACGAAACCCCA
AAATGAGGATCTGCCCAAAGGTTCACTGGACCTGAGAATCCATGATCTGCGTCACACCTATGCCAGCATGCTGGCCAGCA
AAAAGGTCCCCCTGCAGGTGGTCGGCGCCTTGCTCGGACACACCCAGGCGCAGACCACTTTGCGCTATGCCCATCTCTAT
GATGACCCGCTGCGTGAGGCAACGGAATTTGCAGCCACCGCGATCAGCGGTATCGGCGACAATCGAAAGTAG

Upstream 100 bases:

>100_bases
TGGTTCCTGCGCTTCGACATCTCTGATCTCCTCGTAGTTGGGGATCAGCAAACATCAGATCGTAGCTTCCGTCAGTGTCC
AATTTCCGGGGAGTAGCTCA

Downstream 100 bases:

>100_bases
TGTCAGCAACAATCGACAAACATATAAATTGCCCTTTACCATCACACTCGACTAGAGGGTGAAATTACCACTACCGAGAG
CGCCAACCGCATAAAAGCCG

Product: integrase

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein; Phage-Related Integrase; CPS-53 Prophage; Site-Specific Recombinase Phage Integrase Family; Phage Related Integrase; Site-Specific Recombinase/Integrase; Prophage; Prophage Integrase; Integrase Or Site-Specific Recombinase

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLSKALNLAKRWEWIAKNVAEGTQMYPEHPRKRYASPAELARVLEAIANHPQQDSCDAIRLLILTGARKGEVFTARWEDI
DLDAGIWSKPSAHTKQNQEHIAPLSGTAIQLLKRRKETAAGQWVFPGRVSSDEHITDVKKTWDACRKAATLALWRESPSI
AAIIDGLHADLKRAPTIEEIQAATKPQNEDLPKGSLDLRIHDLRHTYASMLASKKVPLQVVGALLGHTQAQTTLRYAHLY
DDPLREATEFAATAISGIGDNRK

Sequences:

>Translated_263_residues
MLSKALNLAKRWEWIAKNVAEGTQMYPEHPRKRYASPAELARVLEAIANHPQQDSCDAIRLLILTGARKGEVFTARWEDI
DLDAGIWSKPSAHTKQNQEHIAPLSGTAIQLLKRRKETAAGQWVFPGRVSSDEHITDVKKTWDACRKAATLALWRESPSI
AAIIDGLHADLKRAPTIEEIQAATKPQNEDLPKGSLDLRIHDLRHTYASMLASKKVPLQVVGALLGHTQAQTTLRYAHLY
DDPLREATEFAATAISGIGDNRK
>Mature_263_residues
MLSKALNLAKRWEWIAKNVAEGTQMYPEHPRKRYASPAELARVLEAIANHPQQDSCDAIRLLILTGARKGEVFTARWEDI
DLDAGIWSKPSAHTKQNQEHIAPLSGTAIQLLKRRKETAAGQWVFPGRVSSDEHITDVKKTWDACRKAATLALWRESPSI
AAIIDGLHADLKRAPTIEEIQAATKPQNEDLPKGSLDLRIHDLRHTYASMLASKKVPLQVVGALLGHTQAQTTLRYAHLY
DDPLREATEFAATAISGIGDNRK

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29242; Mature: 29242

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKALNLAKRWEWIAKNVAEGTQMYPEHPRKRYASPAELARVLEAIANHPQQDSCDAIR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
LLILTGARKGEVFTARWEDIDLDAGIWSKPSAHTKQNQEHIAPLSGTAIQLLKRRKETAA
HHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHC
GQWVFPGRVSSDEHITDVKKTWDACRKAATLALWRESPSIAAIIDGLHADLKRAPTIEEI
CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
QAATKPQNEDLPKGSLDLRIHDLRHTYASMLASKKVPLQVVGALLGHTQAQTTLRYAHLY
HHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHH
DDPLREATEFAATAISGIGDNRK
CHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLSKALNLAKRWEWIAKNVAEGTQMYPEHPRKRYASPAELARVLEAIANHPQQDSCDAIR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
LLILTGARKGEVFTARWEDIDLDAGIWSKPSAHTKQNQEHIAPLSGTAIQLLKRRKETAA
HHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHC
GQWVFPGRVSSDEHITDVKKTWDACRKAATLALWRESPSIAAIIDGLHADLKRAPTIEEI
CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
QAATKPQNEDLPKGSLDLRIHDLRHTYASMLASKKVPLQVVGALLGHTQAQTTLRYAHLY
HHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHH
DDPLREATEFAATAISGIGDNRK
CHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA