| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310810
Identifier: 83310810
GI number: 83310810
Start: 1858813
End: 1859904
Strand: Reverse
Name: 83310810
Synonym: amb1711
Alternate gene names: NA
Gene position: 1859904-1858813 (Counterclockwise)
Preceding gene: 83310823
Following gene: 83310809
Centisome position: 37.44
GC content: 68.32
Gene sequence:
>1092_bases ATGCAAATCCGGGCAAGCGATGACCGGTCCTTGGTGCGAGCGGTGGTGGACGGCGATCCCCATGCCTGGGAACGCTTGGC CCGCCGCATCGGCGATACCGTATGGACCGCCTGCCGGTTGCTGACCCCGGTCGAGGCCGAGGCGCGGGACGCCTTCGCCG ACGTGGTCGCGGCGCTGCGCGCAAATGGCTTTGGCCGCCTTCGGTCCTATGGCGGGAACAGCCGGATTGAGACCTTCATC GTCCTGGTCGCCCGCGACATTCTGGCCCAGCGCCTGCTGCGGCTGTTCCAGGAAAAAGACCTCGACCGGGCCTGGACCGC CTTCGAATCTTTCTTCAAGGCCGATATCCGCCGCATCGTCGCCAACCGCCTGCCGGGGCCAGAGCGCGAGGACATGCGGG GCGACGCCTATCAGGACATCTGCCTGGCGCTGATCGCCGAGGATTACCGTCGCCTCAAGGCCTATGGCGGTGCTGGCAGC TTCTCCGGTTTCGTCCTGCACGCCGTCGACCGGCTGCTGATCGATTTCATCCGCCGCCACAGCCCCCGCCGCCGCCTGCC CGCCGCCATCGCCCGGCTGGGGCCGCTGGATCAGGCGGTGTTCCGCTATGTGCATTGGGAGCGGATCGCCCCGCAGCCCG ACGCCATTCTCCCCATGGCGGCGCGGGAGTTCGATCCGCCCCCGTCATCCGCCGACATCGCCCAGGCGCTGGAGCGGGTG GCCAAGGCCCTGCCCGATGGCTATGAGCCCGGTGTGGCAGGATCGGCGCCGGTTTCCCTGGGTGATTGGGGCGAGGCACT GCCCGATGACGGACCGACACCGGAACAGGCAGTGCTGGCGGCGGAGGAGACGCGCCTGCTGACCCTGGCCTCCGACGCCT TGCGGAGTGCGAGCGAGGGGCTGAGCGATACCGAACGGCTTTACGTCATGATCGCCCTGGGGCATGGCCAGCCCCTGACC GCGCGGGACGTGGCGCACCGGATGCGCCGTCCGGTGGAAGAGATCTATAAGCTGAAACAGCGGGTGATGGGACGGCTGCG CAAGGCCATCGAGGACCACCCCGCCGTCAAACAATGGCTGGCGTCCGTCTAA
Upstream 100 bases:
>100_bases TTGCCCATGATTTTCCACGGGACCATGGTCAGTGTCTATCCCGGCGCGAATAGCTTGGGTACAGTAGCGCCGGAACAGGG GCGGAGAGTTCAGAGCCGAT
Downstream 100 bases:
>100_bases TGGGGTGCAAGGAGAGCAAGCGACCGTGACCCGTGAAGACCTGCATGCCCTGATCGACAGACTGCTTGGCGCCACCGACG CTTCCGCCGCCGGTGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MQIRASDDRSLVRAVVDGDPHAWERLARRIGDTVWTACRLLTPVEAEARDAFADVVAALRANGFGRLRSYGGNSRIETFI VLVARDILAQRLLRLFQEKDLDRAWTAFESFFKADIRRIVANRLPGPEREDMRGDAYQDICLALIAEDYRRLKAYGGAGS FSGFVLHAVDRLLIDFIRRHSPRRRLPAAIARLGPLDQAVFRYVHWERIAPQPDAILPMAAREFDPPPSSADIAQALERV AKALPDGYEPGVAGSAPVSLGDWGEALPDDGPTPEQAVLAAEETRLLTLASDALRSASEGLSDTERLYVMIALGHGQPLT ARDVAHRMRRPVEEIYKLKQRVMGRLRKAIEDHPAVKQWLASV
Sequences:
>Translated_363_residues MQIRASDDRSLVRAVVDGDPHAWERLARRIGDTVWTACRLLTPVEAEARDAFADVVAALRANGFGRLRSYGGNSRIETFI VLVARDILAQRLLRLFQEKDLDRAWTAFESFFKADIRRIVANRLPGPEREDMRGDAYQDICLALIAEDYRRLKAYGGAGS FSGFVLHAVDRLLIDFIRRHSPRRRLPAAIARLGPLDQAVFRYVHWERIAPQPDAILPMAAREFDPPPSSADIAQALERV AKALPDGYEPGVAGSAPVSLGDWGEALPDDGPTPEQAVLAAEETRLLTLASDALRSASEGLSDTERLYVMIALGHGQPLT ARDVAHRMRRPVEEIYKLKQRVMGRLRKAIEDHPAVKQWLASV >Mature_363_residues MQIRASDDRSLVRAVVDGDPHAWERLARRIGDTVWTACRLLTPVEAEARDAFADVVAALRANGFGRLRSYGGNSRIETFI VLVARDILAQRLLRLFQEKDLDRAWTAFESFFKADIRRIVANRLPGPEREDMRGDAYQDICLALIAEDYRRLKAYGGAGS FSGFVLHAVDRLLIDFIRRHSPRRRLPAAIARLGPLDQAVFRYVHWERIAPQPDAILPMAAREFDPPPSSADIAQALERV AKALPDGYEPGVAGSAPVSLGDWGEALPDDGPTPEQAVLAAEETRLLTLASDALRSASEGLSDTERLYVMIALGHGQPLT ARDVAHRMRRPVEEIYKLKQRVMGRLRKAIEDHPAVKQWLASV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40454; Mature: 40454
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIRASDDRSLVRAVVDGDPHAWERLARRIGDTVWTACRLLTPVEAEARDAFADVVAALR CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ANGFGRLRSYGGNSRIETFIVLVARDILAQRLLRLFQEKDLDRAWTAFESFFKADIRRIV HCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ANRLPGPEREDMRGDAYQDICLALIAEDYRRLKAYGGAGSFSGFVLHAVDRLLIDFIRRH HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC SPRRRLPAAIARLGPLDQAVFRYVHWERIAPQPDAILPMAAREFDPPPSSADIAQALERV CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHH AKALPDGYEPGVAGSAPVSLGDWGEALPDDGPTPEQAVLAAEETRLLTLASDALRSASEG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LSDTERLYVMIALGHGQPLTARDVAHRMRRPVEEIYKLKQRVMGRLRKAIEDHPAVKQWL CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ASV HCC >Mature Secondary Structure MQIRASDDRSLVRAVVDGDPHAWERLARRIGDTVWTACRLLTPVEAEARDAFADVVAALR CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ANGFGRLRSYGGNSRIETFIVLVARDILAQRLLRLFQEKDLDRAWTAFESFFKADIRRIV HCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ANRLPGPEREDMRGDAYQDICLALIAEDYRRLKAYGGAGSFSGFVLHAVDRLLIDFIRRH HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC SPRRRLPAAIARLGPLDQAVFRYVHWERIAPQPDAILPMAAREFDPPPSSADIAQALERV CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHH AKALPDGYEPGVAGSAPVSLGDWGEALPDDGPTPEQAVLAAEETRLLTLASDALRSASEG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LSDTERLYVMIALGHGQPLTARDVAHRMRRPVEEIYKLKQRVMGRLRKAIEDHPAVKQWL CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ASV HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA