| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is motA [C]
Identifier: 83310797
GI number: 83310797
Start: 1845640
End: 1846530
Strand: Reverse
Name: motA [C]
Synonym: amb1698
Alternate gene names: 83310797
Gene position: 1846530-1845640 (Counterclockwise)
Preceding gene: 83310798
Following gene: 83310796
Centisome position: 37.17
GC content: 63.64
Gene sequence:
>891_bases TTGCGCAGATCTCGTCTCTGGACAGCCCCCTATCTTGACGCAAAACATCGCAATGGCCTTCATGGCGGGAGCATTCGCGT GACGATATTTTCATCCGCAATCCAGTCAGTTCGTGCGCTACGCCACGAGGCCCCGACGCGGGAAGCCGCCCTGGCCCTGC TGCTGTGCCTGTGCGACCTGTGGGCATTTGCCAGGGACAAGGGCGATCTGGCGTTGGAGGCCCATGTGGAAGCGCCGCTC ACCGATTCCCTGTTCCTCCGTCATCAGGCCGTGTGCGATCTGCCCTGGCTGCTGACGCCACTGGTGGATTTCGCTCGGCG GCTGACCCTGGGCTGCAGCAACGCAAAACAAGCCCGACGCCTGTTGCTGGCCTATCGGGAGACCGAGCGGCGTGCCCTGG AGCAGGTTCTGCGGCAAGCGTCGATGGTCTGGCCGCTGGGACTTTGCCTGTGGCTCGCCGGTCTGGCGGTGCTGGGGGAG ACGGGCATCACGGCGCTGGCCTGGTGGGGGGCCTCGCTGGCCGCCGCTGGCGTGGTGGCAGGAGTCTGGCTGGTCCGCCT TCGCGCCATCGTCGCTCAACGTCTTGGAATTCTCGATGCCATGATCGAGGGCTGCCTGTCCTATCTGAACGGCTACGTGC CTCGGGTCTGCGCCGAGAATGCCCGCTCGGTCCTGCCGCCAGCCTTGAGGCCGAGTTGCTTCGACCTGGACGAGGCCCTT GGCGCAAACAGCACATCCATCCGCGCAATTGGCACAGTCGCTGCCCGAAGTAAGGTACTCGATCTGCTTGGGTCCAAGGA CGAGTCCGGGGAACCGACCGTCGGAACCAAGGAAGAAGAAGACCTGCTGGCCCTGTGGAAACGGATGAATGGAGAGGAAA AACTACCTTGA
Upstream 100 bases:
>100_bases GTGGAGATTCTTGAGGCCCAGCGCACGATCATCAAGACGCTCGGAAACTTACGTGCGACAGGGACTTTGCCGGATCAGGC GACCTTGGACAGGGAGTTTT
Downstream 100 bases:
>100_bases TGACCCAAAGCAGCACAGCAAAATCAGCAATGCACAGAATCACTACAACCCACAGCAACAGAGGCAAGAAATGGATGCAA TAAAGAGGGCGATGTCATTA
Product: flagellar motor component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MRRSRLWTAPYLDAKHRNGLHGGSIRVTIFSSAIQSVRALRHEAPTREAALALLLCLCDLWAFARDKGDLALEAHVEAPL TDSLFLRHQAVCDLPWLLTPLVDFARRLTLGCSNAKQARRLLLAYRETERRALEQVLRQASMVWPLGLCLWLAGLAVLGE TGITALAWWGASLAAAGVVAGVWLVRLRAIVAQRLGILDAMIEGCLSYLNGYVPRVCAENARSVLPPALRPSCFDLDEAL GANSTSIRAIGTVAARSKVLDLLGSKDESGEPTVGTKEEEDLLALWKRMNGEEKLP
Sequences:
>Translated_296_residues MRRSRLWTAPYLDAKHRNGLHGGSIRVTIFSSAIQSVRALRHEAPTREAALALLLCLCDLWAFARDKGDLALEAHVEAPL TDSLFLRHQAVCDLPWLLTPLVDFARRLTLGCSNAKQARRLLLAYRETERRALEQVLRQASMVWPLGLCLWLAGLAVLGE TGITALAWWGASLAAAGVVAGVWLVRLRAIVAQRLGILDAMIEGCLSYLNGYVPRVCAENARSVLPPALRPSCFDLDEAL GANSTSIRAIGTVAARSKVLDLLGSKDESGEPTVGTKEEEDLLALWKRMNGEEKLP >Mature_296_residues MRRSRLWTAPYLDAKHRNGLHGGSIRVTIFSSAIQSVRALRHEAPTREAALALLLCLCDLWAFARDKGDLALEAHVEAPL TDSLFLRHQAVCDLPWLLTPLVDFARRLTLGCSNAKQARRLLLAYRETERRALEQVLRQASMVWPLGLCLWLAGLAVLGE TGITALAWWGASLAAAGVVAGVWLVRLRAIVAQRLGILDAMIEGCLSYLNGYVPRVCAENARSVLPPALRPSCFDLDEAL GANSTSIRAIGTVAARSKVLDLLGSKDESGEPTVGTKEEEDLLALWKRMNGEEKLP
Specific function: Required For Rotation Of The Flagellar Motor. Probable Transmembrane Proton Channel. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32380; Mature: 32380
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSRLWTAPYLDAKHRNGLHGGSIRVTIFSSAIQSVRALRHEAPTREAALALLLCLCDL CCCCCCCCCCCCCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH WAFARDKGDLALEAHVEAPLTDSLFLRHQAVCDLPWLLTPLVDFARRLTLGCSNAKQARR HHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH LLLAYRETERRALEQVLRQASMVWPLGLCLWLAGLAVLGETGITALAWWGASLAAAGVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVWLVRLRAIVAQRLGILDAMIEGCLSYLNGYVPRVCAENARSVLPPALRPSCFDLDEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH GANSTSIRAIGTVAARSKVLDLLGSKDESGEPTVGTKEEEDLLALWKRMNGEEKLP CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRSRLWTAPYLDAKHRNGLHGGSIRVTIFSSAIQSVRALRHEAPTREAALALLLCLCDL CCCCCCCCCCCCCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH WAFARDKGDLALEAHVEAPLTDSLFLRHQAVCDLPWLLTPLVDFARRLTLGCSNAKQARR HHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH LLLAYRETERRALEQVLRQASMVWPLGLCLWLAGLAVLGETGITALAWWGASLAAAGVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVWLVRLRAIVAQRLGILDAMIEGCLSYLNGYVPRVCAENARSVLPPALRPSCFDLDEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH GANSTSIRAIGTVAARSKVLDLLGSKDESGEPTVGTKEEEDLLALWKRMNGEEKLP CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA