| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is efeU [H]
Identifier: 83310780
GI number: 83310780
Start: 1819128
End: 1819937
Strand: Reverse
Name: efeU [H]
Synonym: amb1681
Alternate gene names: 83310780
Gene position: 1819937-1819128 (Counterclockwise)
Preceding gene: 83310782
Following gene: 83310774
Centisome position: 36.64
GC content: 69.88
Gene sequence:
>810_bases ATGTTGGCATCAGCCGTCATCGTTTTTCGCGAGGTTCTGGAAGCCGCCCTGATCGTCGGCATTGTCCTGGCCGCCACCAA AGGATTGGCCGGCAGCCGCCGATGGGTGACCGCCGGAATCCTGGCCGGGCTGCTGGGATCGGCCGTCATCGCCGGCTCGG CGGAGGCTCTGTCCGATGCCTTGTCGGGCATGGGACAGGAGCTGTTCAACGCCTCCATTCTGGGAGTGGCCGTGCTGATG CTGGGCTGGCACACCGTCTGGATGAGCAGCCACGGCCGCGAGATGGCCGCCGAGATGAAGCGGGTCGGCCACGCCGTGGT GGTCGGCGCCCGCCCCCTGTCCGTCCTGGCGGTGGTGGTCGGCGTCGCCGTGCTGCGCGAAGGCGCCGAGACCGTGCTGT TCGTCTTCGGCATCTCCACGGCCGAGGAGGGCGGCAAGATGGCCACCATCGCCGGCTGCGCCGTGGGCCTGGGCGCCGGC ATCACCGTGGGCACCCTGCTCTATCGCGGCCTGCTGGCCATCCCCACCCGTCACCTGTTCTCGGTCACCACCTGGCTGGT GACCCTGCTGGCCGCCGGCATGGCGGCTCAGGCGGTGACCTATCTGTCCGCCGCCGGCGTGATCGAGATGGCGCCGCAGC CGTTGTGGGATACCTCGTGGCTGCTGTCCGAGACCAGCATCGGCGGCCGCCTGCTCCACACCCTGGTGGGCTATATGGAC CGCCCCAGCGCCGTCCAGCTGCTTGCCTATGGCGCCACCTTGCTCGGCATCACCGCCCTGGCGCGGGTGGCCGGACGGCA GCACGCCTGA
Upstream 100 bases:
>100_bases TGACCTATCTCAAGTATGGGAATATTGCAAATGCGAGCTATTTGCAATATTCCTGTCGTGAGTTGAATCAAGCCCCTTCG GGGTGAAGCACGAGGCCCCA
Downstream 100 bases:
>100_bases GGGTCGCGCCATTCCCGGATTGAAGGCTGCGGAGAAACTCCGCTTCGGGGGCGTTTGCCCCCGATCCCCCAACCGGGAAG CACAGCTTCCCGAACCCTTC
Product: high-affinity Fe2+/Pb2+ permease
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MLASAVIVFREVLEAALIVGIVLAATKGLAGSRRWVTAGILAGLLGSAVIAGSAEALSDALSGMGQELFNASILGVAVLM LGWHTVWMSSHGREMAAEMKRVGHAVVVGARPLSVLAVVVGVAVLREGAETVLFVFGISTAEEGGKMATIAGCAVGLGAG ITVGTLLYRGLLAIPTRHLFSVTTWLVTLLAAGMAAQAVTYLSAAGVIEMAPQPLWDTSWLLSETSIGGRLLHTLVGYMD RPSAVQLLAYGATLLGITALARVAGRQHA
Sequences:
>Translated_269_residues MLASAVIVFREVLEAALIVGIVLAATKGLAGSRRWVTAGILAGLLGSAVIAGSAEALSDALSGMGQELFNASILGVAVLM LGWHTVWMSSHGREMAAEMKRVGHAVVVGARPLSVLAVVVGVAVLREGAETVLFVFGISTAEEGGKMATIAGCAVGLGAG ITVGTLLYRGLLAIPTRHLFSVTTWLVTLLAAGMAAQAVTYLSAAGVIEMAPQPLWDTSWLLSETSIGGRLLHTLVGYMD RPSAVQLLAYGATLLGITALARVAGRQHA >Mature_269_residues MLASAVIVFREVLEAALIVGIVLAATKGLAGSRRWVTAGILAGLLGSAVIAGSAEALSDALSGMGQELFNASILGVAVLM LGWHTVWMSSHGREMAAEMKRVGHAVVVGARPLSVLAVVVGVAVLREGAETVLFVFGISTAEEGGKMATIAGCAVGLGAG ITVGTLLYRGLLAIPTRHLFSVTTWLVTLLAAGMAAQAVTYLSAAGVIEMAPQPLWDTSWLLSETSIGGRLLHTLVGYMD RPSAVQLLAYGATLLGITALARVAGRQHA
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 27580; Mature: 27580
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASAVIVFREVLEAALIVGIVLAATKGLAGSRRWVTAGILAGLLGSAVIAGSAEALSDA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LSGMGQELFNASILGVAVLMLGWHTVWMSSHGREMAAEMKRVGHAVVVGARPLSVLAVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHH GVAVLREGAETVLFVFGISTAEEGGKMATIAGCAVGLGAGITVGTLLYRGLLAIPTRHLF HHHHHHCCCHHEEEEEECCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHH SVTTWLVTLLAAGMAAQAVTYLSAAGVIEMAPQPLWDTSWLLSETSIGGRLLHTLVGYMD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCC RPSAVQLLAYGATLLGITALARVAGRQHA CCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLASAVIVFREVLEAALIVGIVLAATKGLAGSRRWVTAGILAGLLGSAVIAGSAEALSDA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LSGMGQELFNASILGVAVLMLGWHTVWMSSHGREMAAEMKRVGHAVVVGARPLSVLAVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHH GVAVLREGAETVLFVFGISTAEEGGKMATIAGCAVGLGAGITVGTLLYRGLLAIPTRHLF HHHHHHCCCHHEEEEEECCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHH SVTTWLVTLLAAGMAAQAVTYLSAAGVIEMAPQPLWDTSWLLSETSIGGRLLHTLVGYMD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCC RPSAVQLLAYGATLLGITALARVAGRQHA CCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]