| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83310721
Identifier: 83310721
GI number: 83310721
Start: 1750819
End: 1752327
Strand: Reverse
Name: 83310721
Synonym: amb1622
Alternate gene names: NA
Gene position: 1752327-1750819 (Counterclockwise)
Preceding gene: 83310722
Following gene: 83310720
Centisome position: 35.28
GC content: 65.67
Gene sequence:
>1509_bases GTGTTGTCGTCGTTCGTCTACGCACTGACGTGGGTATTCCTGCCTCTAATGGTGAATACCACTCTTAATCGTGACACCAT TCAGATCGTCTACTGGGGACTGGAGTGGCAGCCGGGCTTCTTCAAGCACCCACCGTTGATCAGCTGGGTGAGCGAAGTCG CCATCAGGCTGTTCGGGGCCTCGGACGCCGTGATCTATGGCCTCAGCGTCGCGGTGATGCTGAGCTCGTTCGGCTTCATC CATCGGCTGGCACGGCGCTATCTGGACAGCATGGGCGCGGCCCTGGCCGTGGTAACCCTGCCGGTTCTGGGCTATTACAG TTACATCGTCCCCCACTTCAACCACAACATCGCCCTCAATCTGCCCTGGTGCGCGGCCATCTGGTTCGCCTATCTGGCCA TCGAGGAACGGCGGGGTTGGGCGTGGCCCCTGCTGGGGCTGGCGCTGGGCGCCGGAATTTTGTCCAAATACACCATCCTG ATTCTGCCGCTGCTGTTCCTGATCCATGTGGTGGCGACGCCCCAGCATCGCTGGGTTCTGCATTCGCCGCGGGTCTGGGG GGCGGTTGGGCTGTGCCTGCTGGTGGCCGGCCCTCATCTCTACTGGCTAGTGACTCACGGCCTCGGGCCGCTTCGCTACT TGTCCAGCGGAGCCGGGCTGAGCGACGACACCTTCCTCGATCGTCATCTGGTCAATCCGGCCGCGGCCCTGCTCACCATG GCCGGCATGTGCGCCTCGCTGATGATCGCCCTGGTGGGCGGCCTGGGCCTGCCCAAGCTGCAACCCGCCAGATGGTGCAG CAAAGACCGCTTCCTGCTGCTGGTCGGCCTCGGTCCGGCGGCCCTGGTGACCATCTTGTCGGCGATCACCGGCGGTGGGC TGCGCGTCGAATGGGCGGCATCGTTCTTCCTGCCCCTTCCGATTCTGCTGCTGCGGCTGTTCTATCCGCCGCCCACGCCA TGGCGAATCAACCGGCTGCTGGCCTGGACCAGCGGCCTGATGGTGGCCATGGCCACCACCTACGTGCTGATCTTCACCGG CATCATCGCCGACATGGACGAGGGAAAGTGGTCACGCTTCCCCGACCGGCCGCTGGCCGCCGCCGCCGCCGATGGATGGA GCCAGGTTTGCAACACCCCCGTGCCGGTGATCATCGCCGATGCCTGGCTGGGCGGCACCGCATCATTCCGGCTGCGGGAA CGGCCCCGCGTCTATAGCGAAGCCGATTCCCAGATGGCTCCCTGGCTGTCAGACGAGGACATCCGCAGCAGCGGCGCACT CATCTTGTGGGATCAGGCGCTGAACGGCCGCTATCGCGACATCGATCACCAGGATGCCCCCCGGCCGGGCGAGCCCCTGG ACTGGTTCCCCGGCATTCCCGCCCTGGAAGCCCGGTTCGGCCCCATTACCGTGCTGCCCGACGTGACGCTGGATTATCCC GGCCCCGTCGCCCAGGCCCCGGTAGTTCTGGGCCGCGCCGTGATCCCGCCGGCTCGGCCCTGCCGTTAA
Upstream 100 bases:
>100_bases GGACCTCTTACACAAGTCGTCAGCTACTGTATTCATGGGCCTGTCGCTGGACATCGCCGAGTCCGAACGCAAACAAGCCA TAGGGGTAAAGTCCCTTCTG
Downstream 100 bases:
>100_bases TCCCCGTCCGTCTGGAATTCAGGACGCGCCATCCCCAAATTGGAATAAGTTCAAGATGGGGAGCCGCCGCCATGCCCAAT TGGGACTTTGAGGATTGCGA
Product: glycosyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MLSSFVYALTWVFLPLMVNTTLNRDTIQIVYWGLEWQPGFFKHPPLISWVSEVAIRLFGASDAVIYGLSVAVMLSSFGFI HRLARRYLDSMGAALAVVTLPVLGYYSYIVPHFNHNIALNLPWCAAIWFAYLAIEERRGWAWPLLGLALGAGILSKYTIL ILPLLFLIHVVATPQHRWVLHSPRVWGAVGLCLLVAGPHLYWLVTHGLGPLRYLSSGAGLSDDTFLDRHLVNPAAALLTM AGMCASLMIALVGGLGLPKLQPARWCSKDRFLLLVGLGPAALVTILSAITGGGLRVEWAASFFLPLPILLLRLFYPPPTP WRINRLLAWTSGLMVAMATTYVLIFTGIIADMDEGKWSRFPDRPLAAAAADGWSQVCNTPVPVIIADAWLGGTASFRLRE RPRVYSEADSQMAPWLSDEDIRSSGALILWDQALNGRYRDIDHQDAPRPGEPLDWFPGIPALEARFGPITVLPDVTLDYP GPVAQAPVVLGRAVIPPARPCR
Sequences:
>Translated_502_residues MLSSFVYALTWVFLPLMVNTTLNRDTIQIVYWGLEWQPGFFKHPPLISWVSEVAIRLFGASDAVIYGLSVAVMLSSFGFI HRLARRYLDSMGAALAVVTLPVLGYYSYIVPHFNHNIALNLPWCAAIWFAYLAIEERRGWAWPLLGLALGAGILSKYTIL ILPLLFLIHVVATPQHRWVLHSPRVWGAVGLCLLVAGPHLYWLVTHGLGPLRYLSSGAGLSDDTFLDRHLVNPAAALLTM AGMCASLMIALVGGLGLPKLQPARWCSKDRFLLLVGLGPAALVTILSAITGGGLRVEWAASFFLPLPILLLRLFYPPPTP WRINRLLAWTSGLMVAMATTYVLIFTGIIADMDEGKWSRFPDRPLAAAAADGWSQVCNTPVPVIIADAWLGGTASFRLRE RPRVYSEADSQMAPWLSDEDIRSSGALILWDQALNGRYRDIDHQDAPRPGEPLDWFPGIPALEARFGPITVLPDVTLDYP GPVAQAPVVLGRAVIPPARPCR >Mature_502_residues MLSSFVYALTWVFLPLMVNTTLNRDTIQIVYWGLEWQPGFFKHPPLISWVSEVAIRLFGASDAVIYGLSVAVMLSSFGFI HRLARRYLDSMGAALAVVTLPVLGYYSYIVPHFNHNIALNLPWCAAIWFAYLAIEERRGWAWPLLGLALGAGILSKYTIL ILPLLFLIHVVATPQHRWVLHSPRVWGAVGLCLLVAGPHLYWLVTHGLGPLRYLSSGAGLSDDTFLDRHLVNPAAALLTM AGMCASLMIALVGGLGLPKLQPARWCSKDRFLLLVGLGPAALVTILSAITGGGLRVEWAASFFLPLPILLLRLFYPPPTP WRINRLLAWTSGLMVAMATTYVLIFTGIIADMDEGKWSRFPDRPLAAAAADGWSQVCNTPVPVIIADAWLGGTASFRLRE RPRVYSEADSQMAPWLSDEDIRSSGALILWDQALNGRYRDIDHQDAPRPGEPLDWFPGIPALEARFGPITVLPDVTLDYP GPVAQAPVVLGRAVIPPARPCR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55235; Mature: 55235
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSFVYALTWVFLPLMVNTTLNRDTIQIVYWGLEWQPGFFKHPPLISWVSEVAIRLFGA CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC SDAVIYGLSVAVMLSSFGFIHRLARRYLDSMGAALAVVTLPVLGYYSYIVPHFNHNIALN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LPWCAAIWFAYLAIEERRGWAWPLLGLALGAGILSKYTILILPLLFLIHVVATPQHRWVL CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE HSPRVWGAVGLCLLVAGPHLYWLVTHGLGPLRYLSSGAGLSDDTFLDRHLVNPAAALLTM ECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHH AGMCASLMIALVGGLGLPKLQPARWCSKDRFLLLVGLGPAALVTILSAITGGGLRVEWAA HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHH SFFLPLPILLLRLFYPPPTPWRINRLLAWTSGLMVAMATTYVLIFTGIIADMDEGKWSRF HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDRPLAAAAADGWSQVCNTPVPVIIADAWLGGTASFRLRERPRVYSEADSQMAPWLSDED CCCCCHHHHHCCHHHHHCCCCCEEEEECCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCH IRSSGALILWDQALNGRYRDIDHQDAPRPGEPLDWFPGIPALEARFGPITVLPDVTLDYP HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCEECCC GPVAQAPVVLGRAVIPPARPCR CCCHHCHHHHCCCCCCCCCCCC >Mature Secondary Structure MLSSFVYALTWVFLPLMVNTTLNRDTIQIVYWGLEWQPGFFKHPPLISWVSEVAIRLFGA CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC SDAVIYGLSVAVMLSSFGFIHRLARRYLDSMGAALAVVTLPVLGYYSYIVPHFNHNIALN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LPWCAAIWFAYLAIEERRGWAWPLLGLALGAGILSKYTILILPLLFLIHVVATPQHRWVL CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE HSPRVWGAVGLCLLVAGPHLYWLVTHGLGPLRYLSSGAGLSDDTFLDRHLVNPAAALLTM ECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHH AGMCASLMIALVGGLGLPKLQPARWCSKDRFLLLVGLGPAALVTILSAITGGGLRVEWAA HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHH SFFLPLPILLLRLFYPPPTPWRINRLLAWTSGLMVAMATTYVLIFTGIIADMDEGKWSRF HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDRPLAAAAADGWSQVCNTPVPVIIADAWLGGTASFRLRERPRVYSEADSQMAPWLSDED CCCCCHHHHHCCHHHHHCCCCCEEEEECCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCH IRSSGALILWDQALNGRYRDIDHQDAPRPGEPLDWFPGIPALEARFGPITVLPDVTLDYP HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCEECCC GPVAQAPVVLGRAVIPPARPCR CCCHHCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA