Click here to switch to the map view.

The map label for this gene is fixU [H]

Identifier: 83310680

GI number: 83310680

Start: 1710948

End: 1711163

Strand: Reverse

Name: fixU [H]

Synonym: amb1581

Alternate gene names: 83310680

Gene position: 1711163-1710948 (Counterclockwise)

Preceding gene: 83310681

Following gene: 83310679

Centisome position: 34.45

GC content: 59.72

Gene sequence:

>216_bases
ATGAAGGTCATGCTGCGCAAGGTCGGCGAAAAGTACGAGATCTACGTGCCCAAGAAGGATCTCGAGGAACTGGTCGTCGA
GTCCGAGAAGGACGGCATCTGGGGCGGCACCATCAAGATCGCCAATGGCTGGACCTTTGCCATGCCCGACATGCCGCCCG
ATACCAAGCTGCCCATCACCGTCGAAGCACGAAAGCTGTCCGGCGGCGACGACTGA

Upstream 100 bases:

>100_bases
GCTTCTACGTCTATTCCGTGGACTTCGTGGAAGCCCGGATGCTGGTCGGCATGCGGGCCCACGAACTCAAGCGGATCGAA
GAAGAAGAGAGGAAGGCGTC

Downstream 100 bases:

>100_bases
TCCCCATGCAGGAGGACGCGGCCATGCTCGACTCCCCTCGTTCGCTGCTCGCCGGTATCGGCGCGGAGATTGCTGCGGGC
AATCTCATCCCCTTCCTGGG

Product: protein fixU-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MKVMLRKVGEKYEIYVPKKDLEELVVESEKDGIWGGTIKIANGWTFAMPDMPPDTKLPITVEARKLSGGDD

Sequences:

>Translated_71_residues
MKVMLRKVGEKYEIYVPKKDLEELVVESEKDGIWGGTIKIANGWTFAMPDMPPDTKLPITVEARKLSGGDD
>Mature_71_residues
MKVMLRKVGEKYEIYVPKKDLEELVVESEKDGIWGGTIKIANGWTFAMPDMPPDTKLPITVEARKLSGGDD

Specific function: Unknown

COG id: COG5554

COG function: function code Q; Nitrogen fixation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.leguminosarum Sym plasmid fixU. Also to the N- terminal of R.meliloti mosB protein [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009727 [H]

Pfam domain/function: PF06988 NifT [H]

EC number: NA

Molecular weight: Translated: 7966; Mature: 7966

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMLRKVGEKYEIYVPKKDLEELVVESEKDGIWGGTIKIANGWTFAMPDMPPDTKLPIT
CCCCHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCEE
VEARKLSGGDD
EEEEECCCCCC
>Mature Secondary Structure
MKVMLRKVGEKYEIYVPKKDLEELVVESEKDGIWGGTIKIANGWTFAMPDMPPDTKLPIT
CCCCHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCEE
VEARKLSGGDD
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]