Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310679

Identifier: 83310679

GI number: 83310679

Start: 1710070

End: 1710942

Strand: Reverse

Name: 83310679

Synonym: amb1580

Alternate gene names: NA

Gene position: 1710942-1710070 (Counterclockwise)

Preceding gene: 83310680

Following gene: 83310678

Centisome position: 34.45

GC content: 67.24

Gene sequence:

>873_bases
ATGCAGGAGGACGCGGCCATGCTCGACTCCCCTCGTTCGCTGCTCGCCGGTATCGGCGCGGAGATTGCTGCGGGCAATCT
CATCCCCTTCCTGGGGCCTGACGTGCTGACCATCGGGGCGGAACCGCCGGTGCCGGTCGGGGCTCGTGCCCTGTCCCTGG
CCCTGGCGTCCAAGGTGGGCGTTCCCGGCCGCATCAAGAATAACCTGTGGCATTCCGCCCAGTACATCGAGACCCACAAG
CACCGGGTCACCCTGGACAAGCTGATGGCCGCCTTCTTCCAGCCGGTGCCGGAGCCCAACGCCCTGCACCGCTGGCTGGC
CGGGCTGCCCAAGCTGCCCATGGTGGTCGACACCTGGTATGACGGCGCCATGAAGGCCGCCTTCGAGACGGCGGGACGCG
ACAACTGGGGCATCGTCCAGGGCTGTTCCAAGGCGCGGCGTCTGGATGGCGGCGTCTGGTTCCGGGCCGTTTCGCCCGAT
GGCGCCATCGTCGGCGACGACGTGGCCGACGGCTGGCGCACCGTGCTTTACAAGCCCCATGGCGCCGCCCAGCCCACCGG
CGACGTGCTGGTGTCGGATTCAGACTATGTGGAAGTGCTGACCGACATCGACATCGGGACCCCCATTCCCCAGGTGGTCA
AGGATCGCCGGTCCAGCCGGGGCTTCGTCTTCCTGGGCTGCCGCTTCTATGACCAGATTCTGCGGACCTTCGCCCGCCAG
ATCACCAAGCGTTCGAGCGGCCCGCGTTACGCCGTCATCCCCGGCGACCTGACCCGCAACGAGATCAAGTTCCTGGAGCT
CGAGGGCATCACCCCCATCATCTTGCCGCTGGCCGAGGCCGTCCCTTTGATGACCGAAGCCAACCCGGCCTGA

Upstream 100 bases:

>100_bases
CCAATGGCTGGACCTTTGCCATGCCCGACATGCCGCCCGATACCAAGCTGCCCATCACCGTCGAAGCACGAAAGCTGTCC
GGCGGCGACGACTGATCCCC

Downstream 100 bases:

>100_bases
CCGCCGCCATCAACCCTTGGAGAGGATGAAACATGGCCAATGTGACTTTCAGCGCGCCGACCCTGGAAAAGGACGTCACC
GTCTATGCGGTGGCCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQEDAAMLDSPRSLLAGIGAEIAAGNLIPFLGPDVLTIGAEPPVPVGARALSLALASKVGVPGRIKNNLWHSAQYIETHK
HRVTLDKLMAAFFQPVPEPNALHRWLAGLPKLPMVVDTWYDGAMKAAFETAGRDNWGIVQGCSKARRLDGGVWFRAVSPD
GAIVGDDVADGWRTVLYKPHGAAQPTGDVLVSDSDYVEVLTDIDIGTPIPQVVKDRRSSRGFVFLGCRFYDQILRTFARQ
ITKRSSGPRYAVIPGDLTRNEIKFLELEGITPIILPLAEAVPLMTEANPA

Sequences:

>Translated_290_residues
MQEDAAMLDSPRSLLAGIGAEIAAGNLIPFLGPDVLTIGAEPPVPVGARALSLALASKVGVPGRIKNNLWHSAQYIETHK
HRVTLDKLMAAFFQPVPEPNALHRWLAGLPKLPMVVDTWYDGAMKAAFETAGRDNWGIVQGCSKARRLDGGVWFRAVSPD
GAIVGDDVADGWRTVLYKPHGAAQPTGDVLVSDSDYVEVLTDIDIGTPIPQVVKDRRSSRGFVFLGCRFYDQILRTFARQ
ITKRSSGPRYAVIPGDLTRNEIKFLELEGITPIILPLAEAVPLMTEANPA
>Mature_290_residues
MQEDAAMLDSPRSLLAGIGAEIAAGNLIPFLGPDVLTIGAEPPVPVGARALSLALASKVGVPGRIKNNLWHSAQYIETHK
HRVTLDKLMAAFFQPVPEPNALHRWLAGLPKLPMVVDTWYDGAMKAAFETAGRDNWGIVQGCSKARRLDGGVWFRAVSPD
GAIVGDDVADGWRTVLYKPHGAAQPTGDVLVSDSDYVEVLTDIDIGTPIPQVVKDRRSSRGFVFLGCRFYDQILRTFARQ
ITKRSSGPRYAVIPGDLTRNEIKFLELEGITPIILPLAEAVPLMTEANPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31442; Mature: 31442

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEDAAMLDSPRSLLAGIGAEIAAGNLIPFLGPDVLTIGAEPPVPVGARALSLALASKVG
CCCCHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCC
VPGRIKNNLWHSAQYIETHKHRVTLDKLMAAFFQPVPEPNALHRWLAGLPKLPMVVDTWY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECHH
DGAMKAAFETAGRDNWGIVQGCSKARRLDGGVWFRAVSPDGAIVGDDVADGWRTVLYKPH
CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCEEEEECCC
GAAQPTGDVLVSDSDYVEVLTDIDIGTPIPQVVKDRRSSRGFVFLGCRFYDQILRTFARQ
CCCCCCCCEEECCCCCEEHEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
ITKRSSGPRYAVIPGDLTRNEIKFLELEGITPIILPLAEAVPLMTEANPA
HHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQEDAAMLDSPRSLLAGIGAEIAAGNLIPFLGPDVLTIGAEPPVPVGARALSLALASKVG
CCCCHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCC
VPGRIKNNLWHSAQYIETHKHRVTLDKLMAAFFQPVPEPNALHRWLAGLPKLPMVVDTWY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECHH
DGAMKAAFETAGRDNWGIVQGCSKARRLDGGVWFRAVSPDGAIVGDDVADGWRTVLYKPH
CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCEEEEECCC
GAAQPTGDVLVSDSDYVEVLTDIDIGTPIPQVVKDRRSSRGFVFLGCRFYDQILRTFARQ
CCCCCCCCEEECCCCCEEHEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
ITKRSSGPRYAVIPGDLTRNEIKFLELEGITPIILPLAEAVPLMTEANPA
HHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA