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The map label for this gene is fdxB [H]

Identifier: 83310664

GI number: 83310664

Start: 1694594

End: 1694893

Strand: Reverse

Name: fdxB [H]

Synonym: amb1565

Alternate gene names: 83310664

Gene position: 1694893-1694594 (Counterclockwise)

Preceding gene: 83310665

Following gene: 83310663

Centisome position: 34.12

GC content: 61.67

Gene sequence:

>300_bases
ATGTCGTTTCGCCAATTCACCACCCGCGACGGGTCGGTCTGGATCCCCAAGTACCTGACCAAGATCAGCGCCGAGCTGTG
CATCGGCTGCGGCCGCTGCTTCAAGGTCTGCACCCACAGCGTCATGAAGCTGATGGGCTTCAGCGAAGAGGGCGAGTACA
TCGACCCCGAAGAGGACGACGACGGCGAGATCGAGAAGACCGTCATGGCCATTGCCAATGAGGGCAATTGTATCGGCTGT
GGCGCCTGTTTCGCCGTCTGCGGCACCAAGGCCCAGACTCACGAGCCGGTTCCGGCGTGA

Upstream 100 bases:

>100_bases
GCGCCAAGGCCCAGAAGCTCATCGATGAAGGCGTCGCCACCATTGAGAAGTATCCCGACGTCGCCGCCGCCTGACCTAAA
CCCAAGAGAGGGAGAGTTCC

Downstream 100 bases:

>100_bases
ATGTGAGTGTCATCCCGACGACCTTCGGGAGGAGGGATCTCATTCTGGAACGCTCGGTCCGGATCGAAGCCGACGGTCCA
GGAAGAGATCCCTCGCCAAG

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin III; FdIII [H]

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSFRQFTTRDGSVWIPKYLTKISAELCIGCGRCFKVCTHSVMKLMGFSEEGEYIDPEEDDDGEIEKTVMAIANEGNCIGC
GACFAVCGTKAQTHEPVPA

Sequences:

>Translated_99_residues
MSFRQFTTRDGSVWIPKYLTKISAELCIGCGRCFKVCTHSVMKLMGFSEEGEYIDPEEDDDGEIEKTVMAIANEGNCIGC
GACFAVCGTKAQTHEPVPA
>Mature_98_residues
SFRQFTTRDGSVWIPKYLTKISAELCIGCGRCFKVCTHSVMKLMGFSEEGEYIDPEEDDDGEIEKTVMAIANEGNCIGCG
ACFAVCGTKAQTHEPVPA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014283
- InterPro:   IPR012285 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10805; Mature: 10674

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
11.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRQFTTRDGSVWIPKYLTKISAELCIGCGRCFKVCTHSVMKLMGFSEEGEYIDPEEDD
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DGEIEKTVMAIANEGNCIGCGACFAVCGTKAQTHEPVPA
CCHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SFRQFTTRDGSVWIPKYLTKISAELCIGCGRCFKVCTHSVMKLMGFSEEGEYIDPEEDD
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DGEIEKTVMAIANEGNCIGCGACFAVCGTKAQTHEPVPA
CCHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]