Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is nifQ [H]

Identifier: 83310663

GI number: 83310663

Start: 1693837

End: 1694454

Strand: Reverse

Name: nifQ [H]

Synonym: amb1564

Alternate gene names: 83310663

Gene position: 1694454-1693837 (Counterclockwise)

Preceding gene: 83310664

Following gene: 83310662

Centisome position: 34.11

GC content: 65.53

Gene sequence:

>618_bases
ATGGCCAAGGAGATCTACGCCCGTCTGATGTCCGGCCCCGGCGGCGGCGATCCGTTCGACCGCCACCTGTTCGCCTGTGC
CATCGCCATGGCCCTCTCCACGCCGGGAGAAAGCCTGACGGTGGGGCTTGGGCTTTCCGAGGAATGCCTGGCGGCGCTGG
TGGGGCGAAGCTTCCCCCACGCCCCTGGCCTGCTTTCGGGATTGTCCCTGGACGGCCATGGCGACGAGCCGCTGACCATC
GAGGAGCCCGATCTTCGCGCCCTGTTGCTGGAACACCGGACACGGGGCCTCATCGAGGAGGAATGGATGGCCCATGTGGT
AGCGCGGCGTTGCCTGGGCGCCAACCACCTGTGGCAGGACCTGGGACTGACCAGCCGCGCCGATCTGTCCGGGCTGATGC
GCCGCCACTTCCTCGGCCTGGCCGAGCTGAACAGCCGCGACATGAAGTGGAAGAAGTTCTTCTACCGCGAACTCTGCCAG
AGGGAAGGCGTCATGATCTGCAAGTCGCCCAATTGCGAGGTCTGCACCGACTTCACCACCTGCTTCGGGGCCGAGGACGG
CGTCTCGCTGCTTGTCGCAAAGTCGACATTGTCGGATTCCCCTCCCGCATCCTTCTAG

Upstream 100 bases:

>100_bases
TCATTCTGGAACGCTCGGTCCGGATCGAAGCCGACGGTCCAGGAAGAGATCCCTCGCCAAGGCTCGGGATGACAACACCC
TGTTCCAGGAGGACAAAGCC

Downstream 100 bases:

>100_bases
TGTTTTCAATGCGCTAGCACTTGGCACCCTTCTTGCTGATCCAAAGGACAGGACATTGGTTCCGGCAAGGAGGACACAGT
CATGATGAACCTGACCGACA

Product: NifQ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MAKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPHAPGLLSGLSLDGHGDEPLTI
EEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQDLGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQ
REGVMICKSPNCEVCTDFTTCFGAEDGVSLLVAKSTLSDSPPASF

Sequences:

>Translated_205_residues
MAKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPHAPGLLSGLSLDGHGDEPLTI
EEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQDLGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQ
REGVMICKSPNCEVCTDFTTCFGAEDGVSLLVAKSTLSDSPPASF
>Mature_204_residues
AKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPHAPGLLSGLSLDGHGDEPLTIE
EPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQDLGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQR
EGVMICKSPNCEVCTDFTTCFGAEDGVSLLVAKSTLSDSPPASF

Specific function: Probably involved in molybdenum processing [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006975 [H]

Pfam domain/function: PF04891 NifQ [H]

EC number: NA

Molecular weight: Translated: 22379; Mature: 22248

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPH
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCC
APGLLSGLSLDGHGDEPLTIEEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQD
CCCHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHH
LGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQREGVMICKSPNCEVCTDFTT
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEHHHHH
CFGAEDGVSLLVAKSTLSDSPPASF
HHCCCCCCEEEEEHHHCCCCCCCCC
>Mature Secondary Structure 
AKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPH
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCC
APGLLSGLSLDGHGDEPLTIEEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQD
CCCHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHH
LGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQREGVMICKSPNCEVCTDFTT
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEHHHHH
CFGAEDGVSLLVAKSTLSDSPPASF
HHCCCCCCEEEEEHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]