| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is nifQ [H]
Identifier: 83310663
GI number: 83310663
Start: 1693837
End: 1694454
Strand: Reverse
Name: nifQ [H]
Synonym: amb1564
Alternate gene names: 83310663
Gene position: 1694454-1693837 (Counterclockwise)
Preceding gene: 83310664
Following gene: 83310662
Centisome position: 34.11
GC content: 65.53
Gene sequence:
>618_bases ATGGCCAAGGAGATCTACGCCCGTCTGATGTCCGGCCCCGGCGGCGGCGATCCGTTCGACCGCCACCTGTTCGCCTGTGC CATCGCCATGGCCCTCTCCACGCCGGGAGAAAGCCTGACGGTGGGGCTTGGGCTTTCCGAGGAATGCCTGGCGGCGCTGG TGGGGCGAAGCTTCCCCCACGCCCCTGGCCTGCTTTCGGGATTGTCCCTGGACGGCCATGGCGACGAGCCGCTGACCATC GAGGAGCCCGATCTTCGCGCCCTGTTGCTGGAACACCGGACACGGGGCCTCATCGAGGAGGAATGGATGGCCCATGTGGT AGCGCGGCGTTGCCTGGGCGCCAACCACCTGTGGCAGGACCTGGGACTGACCAGCCGCGCCGATCTGTCCGGGCTGATGC GCCGCCACTTCCTCGGCCTGGCCGAGCTGAACAGCCGCGACATGAAGTGGAAGAAGTTCTTCTACCGCGAACTCTGCCAG AGGGAAGGCGTCATGATCTGCAAGTCGCCCAATTGCGAGGTCTGCACCGACTTCACCACCTGCTTCGGGGCCGAGGACGG CGTCTCGCTGCTTGTCGCAAAGTCGACATTGTCGGATTCCCCTCCCGCATCCTTCTAG
Upstream 100 bases:
>100_bases TCATTCTGGAACGCTCGGTCCGGATCGAAGCCGACGGTCCAGGAAGAGATCCCTCGCCAAGGCTCGGGATGACAACACCC TGTTCCAGGAGGACAAAGCC
Downstream 100 bases:
>100_bases TGTTTTCAATGCGCTAGCACTTGGCACCCTTCTTGCTGATCCAAAGGACAGGACATTGGTTCCGGCAAGGAGGACACAGT CATGATGAACCTGACCGACA
Product: NifQ protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPHAPGLLSGLSLDGHGDEPLTI EEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQDLGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQ REGVMICKSPNCEVCTDFTTCFGAEDGVSLLVAKSTLSDSPPASF
Sequences:
>Translated_205_residues MAKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPHAPGLLSGLSLDGHGDEPLTI EEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQDLGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQ REGVMICKSPNCEVCTDFTTCFGAEDGVSLLVAKSTLSDSPPASF >Mature_204_residues AKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPHAPGLLSGLSLDGHGDEPLTIE EPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQDLGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQR EGVMICKSPNCEVCTDFTTCFGAEDGVSLLVAKSTLSDSPPASF
Specific function: Probably involved in molybdenum processing [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nifQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006975 [H]
Pfam domain/function: PF04891 NifQ [H]
EC number: NA
Molecular weight: Translated: 22379; Mature: 22248
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPH CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCC APGLLSGLSLDGHGDEPLTIEEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQD CCCHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHH LGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQREGVMICKSPNCEVCTDFTT CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEHHHHH CFGAEDGVSLLVAKSTLSDSPPASF HHCCCCCCEEEEEHHHCCCCCCCCC >Mature Secondary Structure AKEIYARLMSGPGGGDPFDRHLFACAIAMALSTPGESLTVGLGLSEECLAALVGRSFPH HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCC APGLLSGLSLDGHGDEPLTIEEPDLRALLLEHRTRGLIEEEWMAHVVARRCLGANHLWQD CCCHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHH LGLTSRADLSGLMRRHFLGLAELNSRDMKWKKFFYRELCQREGVMICKSPNCEVCTDFTT CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEHHHHH CFGAEDGVSLLVAKSTLSDSPPASF HHCCCCCCEEEEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]