| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310589
Identifier: 83310589
GI number: 83310589
Start: 1629905
End: 1630969
Strand: Reverse
Name: 83310589
Synonym: amb1490
Alternate gene names: NA
Gene position: 1630969-1629905 (Counterclockwise)
Preceding gene: 83310590
Following gene: 83310588
Centisome position: 32.84
GC content: 71.74
Gene sequence:
>1065_bases ATGGGCGGGGATAGCCGAAGCGATCTGGAATTGTGGCGGGCAGCGCGCTCCGGCGACGACGCGGCCTGGGCGGCGCTGGC CCGCCGCTGGGCCGATCTGCTGTGGGGCTGCTGCCGCAAGGTGTTCGACGAGGCCGAGTGCGCCCGGGAATTTCCCGCCC TGGTCCGGCGCCTGGGGGCCGAGCGGGCGGCCATGCTGTCCGACTGGGACGGCCGGTCCGGCTTTTCCACCTTTCTGGGG CTGAAGGCCGCCGATGGACTGGCGGAGCGCATCACCACCCTGCTGGCCGAGGATTCCCGGCGCGGCTGGACTGCCTTCGA GCGCTTCTTCGCCGACGACCTCGGCCGCATGGTCCGCCGCCGGCTGGAAGGCGAGGATGCCGAGGATATCTTGCAGGAGT TGCGCCTGCGCCTGATGGCCGATGGCGGGTCCCCGGTGCGGCGCTATGACGGGCGGGGCAGCTTCACCGGCTATGTGCGC CGCGTCGCCCATAACCTGATGGAAGACATCCTGCGCGCCCGCGACGGGCGGCGGCGCGAGCCCGACGCCATCCGCAAGCT GGGCGAGTTGGAGCGCCGCACCTATCATCTGGTCCACATCCAGGGCTATCGCGCCGACCAGTTGCCCGATCTGCTGTCCC TTCCGGCGGCCGAGGCCATGGCCGCCCTGGACCGGGCCGAGGCGGCCCTGGGGCCTCGGCTGGTCCAGCCCGCGCCGCGC ATGGTGCCGCTGACCCTGGTGGATGGCGACGGGCGGGAGTGGGAACGCCCCCTGCCCCATTGGGCGCCCTCGCCCGAGGA AGCCCTGAGCACGGCGCAGGAACGGGAGGAGCTGGAGCGGGCCTGTACCGCCTTGGCGGCGGCCATGGCCCGGCTTCCCG CTTTGGCCCGCCAGTATCTGCGCCTTCGCTTCCTGGAGGTGCCTCCCCTGGCGCCCCGCCACATCGCCGGACGGCTGGGC CTGCCGGTGGACGAGCTGTATCGGCGGCGGAAAAGCTGGGAAGCCTTGCTGCTGGATGAATTAAGGGCGGAAGGGGTGGA GAAATTCCCCCTGCCGCCCGTCTGA
Upstream 100 bases:
>100_bases AACCGGGGGCCTTTCGCCTTTTCTGCCATTCTTGACCTTTCCGCCGCGCCGATTCCGGCTACCATGGCCCCGGCACGGCG TGTGGGGCGGTTCGAGGGCC
Downstream 100 bases:
>100_bases CCAGGGGATGACGATGTCGGACAAGCCCATGCGCGACCAAGACCTCAGCCGCACCCTGTTCTCCGATACGCCGGACCAGG CCGCCGCCGCCCTGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MGGDSRSDLELWRAARSGDDAAWAALARRWADLLWGCCRKVFDEAECAREFPALVRRLGAERAAMLSDWDGRSGFSTFLG LKAADGLAERITTLLAEDSRRGWTAFERFFADDLGRMVRRRLEGEDAEDILQELRLRLMADGGSPVRRYDGRGSFTGYVR RVAHNLMEDILRARDGRRREPDAIRKLGELERRTYHLVHIQGYRADQLPDLLSLPAAEAMAALDRAEAALGPRLVQPAPR MVPLTLVDGDGREWERPLPHWAPSPEEALSTAQEREELERACTALAAAMARLPALARQYLRLRFLEVPPLAPRHIAGRLG LPVDELYRRRKSWEALLLDELRAEGVEKFPLPPV
Sequences:
>Translated_354_residues MGGDSRSDLELWRAARSGDDAAWAALARRWADLLWGCCRKVFDEAECAREFPALVRRLGAERAAMLSDWDGRSGFSTFLG LKAADGLAERITTLLAEDSRRGWTAFERFFADDLGRMVRRRLEGEDAEDILQELRLRLMADGGSPVRRYDGRGSFTGYVR RVAHNLMEDILRARDGRRREPDAIRKLGELERRTYHLVHIQGYRADQLPDLLSLPAAEAMAALDRAEAALGPRLVQPAPR MVPLTLVDGDGREWERPLPHWAPSPEEALSTAQEREELERACTALAAAMARLPALARQYLRLRFLEVPPLAPRHIAGRLG LPVDELYRRRKSWEALLLDELRAEGVEKFPLPPV >Mature_353_residues GGDSRSDLELWRAARSGDDAAWAALARRWADLLWGCCRKVFDEAECAREFPALVRRLGAERAAMLSDWDGRSGFSTFLGL KAADGLAERITTLLAEDSRRGWTAFERFFADDLGRMVRRRLEGEDAEDILQELRLRLMADGGSPVRRYDGRGSFTGYVRR VAHNLMEDILRARDGRRREPDAIRKLGELERRTYHLVHIQGYRADQLPDLLSLPAAEAMAALDRAEAALGPRLVQPAPRM VPLTLVDGDGREWERPLPHWAPSPEEALSTAQEREELERACTALAAAMARLPALARQYLRLRFLEVPPLAPRHIAGRLGL PVDELYRRRKSWEALLLDELRAEGVEKFPLPPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40019; Mature: 39888
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGDSRSDLELWRAARSGDDAAWAALARRWADLLWGCCRKVFDEAECAREFPALVRRLGA CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH ERAAMLSDWDGRSGFSTFLGLKAADGLAERITTLLAEDSRRGWTAFERFFADDLGRMVRR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RLEGEDAEDILQELRLRLMADGGSPVRRYDGRGSFTGYVRRVAHNLMEDILRARDGRRRE HHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC PDAIRKLGELERRTYHLVHIQGYRADQLPDLLSLPAAEAMAALDRAEAALGPRLVQPAPR CHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCHHCCCCCC MVPLTLVDGDGREWERPLPHWAPSPEEALSTAQEREELERACTALAAAMARLPALARQYL EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRFLEVPPLAPRHIAGRLGLPVDELYRRRKSWEALLLDELRAEGVEKFPLPPV HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GGDSRSDLELWRAARSGDDAAWAALARRWADLLWGCCRKVFDEAECAREFPALVRRLGA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH ERAAMLSDWDGRSGFSTFLGLKAADGLAERITTLLAEDSRRGWTAFERFFADDLGRMVRR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RLEGEDAEDILQELRLRLMADGGSPVRRYDGRGSFTGYVRRVAHNLMEDILRARDGRRRE HHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC PDAIRKLGELERRTYHLVHIQGYRADQLPDLLSLPAAEAMAALDRAEAALGPRLVQPAPR CHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCHHCCCCCC MVPLTLVDGDGREWERPLPHWAPSPEEALSTAQEREELERACTALAAAMARLPALARQYL EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRFLEVPPLAPRHIAGRLGLPVDELYRRRKSWEALLLDELRAEGVEKFPLPPV HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA