Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310542

Identifier: 83310542

GI number: 83310542

Start: 1572354

End: 1573418

Strand: Reverse

Name: 83310542

Synonym: amb1443

Alternate gene names: NA

Gene position: 1573418-1572354 (Counterclockwise)

Preceding gene: 83310548

Following gene: 83310541

Centisome position: 31.68

GC content: 63.47

Gene sequence:

>1065_bases
TTGCTGTGGGTGCTGCTAACCACATATCTGGGACTGGCCTTTCTCCACGGAGCCCTGTCCTACGGGCTGCAGACGGCGGT
GGCCTCGTACCGGGCTTCCCTGTATCTGACCGTCGGGGTCAGCTACTTCGCGCTGTTCCAGCACGACAGGAACGATACGA
TCTGGACCCTGAATCTGGTTATCCTGGCCGGACTGGCAGTGGTGCTTTTCGCCATTGCGGCCTGGCTGGTGCCCGAATGG
CGACCGCAGGACCCCGGCCATATGGCCTTGTCCAGCCAGGCCTACGAGCGCAGCCGCGTGCTGCCCGCCCAGGCCGCCCA
ATTTATCGCCCTCGCCGCCTTGCTCAGCCTGCCATCCTGGCTTCAGGTGGGTTCAAGCCTGTGGTTGCGCCTGGCTACTC
TTCCCTTGCTGGCGGTCTCCATCTTCTTGTTCCACCGCTCGGTCTGGGTCATGCTGGCGGTCAGCGTGCTGGTCACGCTG
GCGGCCTCGGGACGTGGCGCCGTGAGGGCGTTCGTCGTCGTCCAGTTCCTGCTGGTCGCCCTGGCCCTGGTATGGCTGCT
GCTGGTCGGCCTGGATATGGATATCCTCTCGGCGTCCCTGCGCACGGCAGTCAATGAAGCCGTCGACCTGGACAACAACA
CGCTGGACTGGCGCATCCAGGGCTGGCGTATCCTGGTGGAGCGGGCCATTTCCGACGGCCCGCTGTCCATCTTGTTCGGA
GCCGGGTTCGGCATCGGATACGAGCGAAACATCGCTCAGTTATATGTGACGGCCTCGCCCCACAATTACTATGTCGAGTT
GTTCCTGACCTCAGGGCTGTTGGGATGCGGCCTGTTCGTTCTATCCATCCTGTCCGTATTCAGACGGGCGCTGTCCCAGG
CGCTCCACGGGGGGGCCAATGAAATGCTGGCGCTGCCGGGGATGGTGATCGGCGTGGTGGTGTACAGCGCCAGTTATTCG
CCCCAATACGACACGGCGCTGATTCTTGGGCTGATTCTGGCTCTTCCCGCCATACCCCGCCGCCGCCCGATTCCGGAAGG
CGTTTCCCAACCGGCGCCGCCATGA

Upstream 100 bases:

>100_bases
GCCTGGAACTACAATCCATGGCACAGATATTTTCTTTATTTCACTGACAATCGCCACGCTCATCCGTCTAATTTCCCTGC
GTCGAATAGATGGCTTGACG

Downstream 100 bases:

>100_bases
TCGGTCGGTGCCTTGTCGCCCTCCTTGCCTGCCATAACCGGCGGACCGTCACCCGGGCCGCCCTGGAGACCCTGTTCCGC
CAGGCCCTGCCGCCGGATCT

Product: Lipid A core - O-antigen ligase and related enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLVILAGLAVVLFAIAAWLVPEW
RPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSWLQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTL
AASGRGAVRAFVVVQFLLVALALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG
AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGANEMLALPGMVIGVVVYSASYS
PQYDTALILGLILALPAIPRRRPIPEGVSQPAPP

Sequences:

>Translated_354_residues
MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLVILAGLAVVLFAIAAWLVPEW
RPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSWLQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTL
AASGRGAVRAFVVVQFLLVALALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG
AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGANEMLALPGMVIGVVVYSASYS
PQYDTALILGLILALPAIPRRRPIPEGVSQPAPP
>Mature_354_residues
MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLVILAGLAVVLFAIAAWLVPEW
RPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSWLQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTL
AASGRGAVRAFVVVQFLLVALALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG
AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGANEMLALPGMVIGVVVYSASYS
PQYDTALILGLILALPAIPRRRPIPEGVSQPAPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38438; Mature: 38438

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCCEEHHHHH
ILAGLAVVLFAIAAWLVPEWRPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSW
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
LQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTLAASGRGAVRAFVVVQFLLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEE
AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGAN
CCCCCCCCCCEEEEEEEECCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EMLALPGMVIGVVVYSASYSPQYDTALILGLILALPAIPRRRPIPEGVSQPAPP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCCEEHHHHH
ILAGLAVVLFAIAAWLVPEWRPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSW
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
LQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTLAASGRGAVRAFVVVQFLLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEE
AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGAN
CCCCCCCCCCEEEEEEEECCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EMLALPGMVIGVVVYSASYSPQYDTALILGLILALPAIPRRRPIPEGVSQPAPP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA