| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310535
Identifier: 83310535
GI number: 83310535
Start: 1564541
End: 1565437
Strand: Reverse
Name: 83310535
Synonym: amb1436
Alternate gene names: NA
Gene position: 1565437-1564541 (Counterclockwise)
Preceding gene: 83310538
Following gene: 83310528
Centisome position: 31.52
GC content: 69.9
Gene sequence:
>897_bases ATGGCTGGTCACGATTCCTGGCCACCCCCGGTGCGGCGGTTTCTGCTGTCGACCCGGGCCGGACGGATTGGGCTGCTCGT CCCCCGTCTGTGCATGGCGGCTTGGCGGTCGCGGGGGCTGCACGCCCTGTGGGCGGCGCTGGTCTGGACCTTTCGCTCGC GTGATATCGCGTCGCGCTCGTACCATACGACGCGGCTGAACCAGGATGAATTGTGCTGGACCATCGCCGCCGTGACCCGG ATTCCGATCGAACGGATCATGGGCTGGCGCGACGAGATCCTGGCCGACGACGACCTCGCCCGGCATGTGCGCCGCGCCGT CGAGTCCTCGCCCGAGCGCTGGTCCCATGACCCCGATTATCGCCTGGGGCGCCGCCTGGCCTATTACCTGCTGACCCGCG CCCTCCGGCCCAAGCGGGTGATCGAGGCGGGAGTGGACCGGGGCTTCGGTGCCGTCCTGATCCTGCGGGCTCTGGAGCGC AATGCCGCCGAGGGCTCTCCCGGCGAGTATCTGGGCATCGACCGCAAGCCGGAAGCCGACGCCTTCCTCTACACCGCCTA TCCCGCCCGCCGGGGCCGCATCCAGTGCGGCGATGCCGCCGCCATCCTGCGCGGCCTGCCCGGCGACGGCAGCCTGATCA TCCACGACACGGGGATCGAGCCGACCCATCTGGCGGCCTTCACCGCGGCGCTCGACGCCATGTTGGCCGACGACACGGTA GTGATCTCGTCCTGGCTGCGTCCCGACTTCATGGATCTGGCGCGCCGCCGGTCGCGCGGATTCCTGGGACACAAGGACAG CGCCCCCGGGCACTGGAAGCCCCCCAGCCGCATGAGCTTCATTTTCCCGGCAGGGCGGCAGGACCAGCGAGACGCCATGC GGACCGAGCTCCCATGA
Upstream 100 bases:
>100_bases ATAAACACAATCCCAACGGGGTTCAAATGACTTTTAGGACCCGTTGCAGTCGATGCGGACCAGCCTTCAAAGGCCCGCGC GGAAGAAAGGACAGGACCCC
Downstream 100 bases:
>100_bases AGAAAGGGGGCGGCCCTCGCGGACGCCCCCTTGACCTGCCGCACGACGGAACGCCGCCCTATTTCGGCTGTTCGACGAAT TCCACGGCGCTGGGCTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAGHDSWPPPVRRFLLSTRAGRIGLLVPRLCMAAWRSRGLHALWAALVWTFRSRDIASRSYHTTRLNQDELCWTIAAVTR IPIERIMGWRDEILADDDLARHVRRAVESSPERWSHDPDYRLGRRLAYYLLTRALRPKRVIEAGVDRGFGAVLILRALER NAAEGSPGEYLGIDRKPEADAFLYTAYPARRGRIQCGDAAAILRGLPGDGSLIIHDTGIEPTHLAAFTAALDAMLADDTV VISSWLRPDFMDLARRRSRGFLGHKDSAPGHWKPPSRMSFIFPAGRQDQRDAMRTELP
Sequences:
>Translated_298_residues MAGHDSWPPPVRRFLLSTRAGRIGLLVPRLCMAAWRSRGLHALWAALVWTFRSRDIASRSYHTTRLNQDELCWTIAAVTR IPIERIMGWRDEILADDDLARHVRRAVESSPERWSHDPDYRLGRRLAYYLLTRALRPKRVIEAGVDRGFGAVLILRALER NAAEGSPGEYLGIDRKPEADAFLYTAYPARRGRIQCGDAAAILRGLPGDGSLIIHDTGIEPTHLAAFTAALDAMLADDTV VISSWLRPDFMDLARRRSRGFLGHKDSAPGHWKPPSRMSFIFPAGRQDQRDAMRTELP >Mature_297_residues AGHDSWPPPVRRFLLSTRAGRIGLLVPRLCMAAWRSRGLHALWAALVWTFRSRDIASRSYHTTRLNQDELCWTIAAVTRI PIERIMGWRDEILADDDLARHVRRAVESSPERWSHDPDYRLGRRLAYYLLTRALRPKRVIEAGVDRGFGAVLILRALERN AAEGSPGEYLGIDRKPEADAFLYTAYPARRGRIQCGDAAAILRGLPGDGSLIIHDTGIEPTHLAAFTAALDAMLADDTVV ISSWLRPDFMDLARRRSRGFLGHKDSAPGHWKPPSRMSFIFPAGRQDQRDAMRTELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33637; Mature: 33506
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGHDSWPPPVRRFLLSTRAGRIGLLVPRLCMAAWRSRGLHALWAALVWTFRSRDIASRS CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCC YHTTRLNQDELCWTIAAVTRIPIERIMGWRDEILADDDLARHVRRAVESSPERWSHDPDY CHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCH RLGRRLAYYLLTRALRPKRVIEAGVDRGFGAVLILRALERNAAEGSPGEYLGIDRKPEAD HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC AFLYTAYPARRGRIQCGDAAAILRGLPGDGSLIIHDTGIEPTHLAAFTAALDAMLADDTV EEEEEECCCCCCCEECCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHH VISSWLRPDFMDLARRRSRGFLGHKDSAPGHWKPPSRMSFIFPAGRQDQRDAMRTELP HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC >Mature Secondary Structure AGHDSWPPPVRRFLLSTRAGRIGLLVPRLCMAAWRSRGLHALWAALVWTFRSRDIASRS CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCC YHTTRLNQDELCWTIAAVTRIPIERIMGWRDEILADDDLARHVRRAVESSPERWSHDPDY CHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCH RLGRRLAYYLLTRALRPKRVIEAGVDRGFGAVLILRALERNAAEGSPGEYLGIDRKPEAD HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC AFLYTAYPARRGRIQCGDAAAILRGLPGDGSLIIHDTGIEPTHLAAFTAALDAMLADDTV EEEEEECCCCCCCEECCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHH VISSWLRPDFMDLARRRSRGFLGHKDSAPGHWKPPSRMSFIFPAGRQDQRDAMRTELP HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA