| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is dhfrIII [H]
Identifier: 83310425
GI number: 83310425
Start: 1445877
End: 1446404
Strand: Reverse
Name: dhfrIII [H]
Synonym: amb1326
Alternate gene names: 83310425
Gene position: 1446404-1445877 (Counterclockwise)
Preceding gene: 83310426
Following gene: 83310424
Centisome position: 29.12
GC content: 68.75
Gene sequence:
>528_bases TTGGTACAAGCCCGCCCGGCGATTGAGGGACAAGCAATGACCCCCTCCGTCGCCCTCATCGTCGCCGTGGCCGCCAACGG GGTGATCGGCAAGGACAACGCCCTGCCCTGGCATATTCCCGAGGACCTGAAGTGGTTCAAGGAGAACACCCTGGGCAAGC CGGTGATCATGGGCCGCAAGACCTGGGAGTCCATCGGCCGCCCTCTCCCCAAGCGCCCCAACATCGTGGTGACGCGCCAG ACCGGGTGGCGGGCCGAGGGGGCGCATACCGCCCATTCCCTGGACGAAGCCCTGGCCCTGGCGGCCCGGCTGGCGCCCGA GGCGGCGGAGCTGATGGTGATCGGCGGCAACAGCCTGTTCGCCGAGGCCCTGCCCGGAGCCCGGCGCCTGTATCTGACCG AGATCGCCCGCGCCTATGAGGGCGACACGATGTTTCCCGCCTTCGAGCGCGGCCTCTGGCATGAAGTTTCGCGGCGCCGC AACGAGGGCGACCCGGCCTTCGACTTCGTGATTCTCGACCGGGCCTGA
Upstream 100 bases:
>100_bases CACGCCCACATCGCCGCACCGGTGGCGGTATGAGTCCGACGAGCGGAGCGAGGAGGCAAGCGCGAAGCGCGCCGCCGCTT ATGCGGCGGGAGCCAAGGGC
Downstream 100 bases:
>100_bases CCGCAACCTGACAGTCACCGTCTTGTAAAGGTTTCCCTGCTCGACAAAGGCAAGGCGGGCAGGCTATGAGGGGCGCACTC AACCCGAACCGGAACGGCCG
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MVQARPAIEGQAMTPSVALIVAVAANGVIGKDNALPWHIPEDLKWFKENTLGKPVIMGRKTWESIGRPLPKRPNIVVTRQ TGWRAEGAHTAHSLDEALALAARLAPEAAELMVIGGNSLFAEALPGARRLYLTEIARAYEGDTMFPAFERGLWHEVSRRR NEGDPAFDFVILDRA
Sequences:
>Translated_175_residues MVQARPAIEGQAMTPSVALIVAVAANGVIGKDNALPWHIPEDLKWFKENTLGKPVIMGRKTWESIGRPLPKRPNIVVTRQ TGWRAEGAHTAHSLDEALALAARLAPEAAELMVIGGNSLFAEALPGARRLYLTEIARAYEGDTMFPAFERGLWHEVSRRR NEGDPAFDFVILDRA >Mature_175_residues MVQARPAIEGQAMTPSVALIVAVAANGVIGKDNALPWHIPEDLKWFKENTLGKPVIMGRKTWESIGRPLPKRPNIVVTRQ TGWRAEGAHTAHSLDEALALAARLAPEAAELMVIGGNSLFAEALPGARRLYLTEIARAYEGDTMFPAFERGLWHEVSRRR NEGDPAFDFVILDRA
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=153, Percent_Identity=38.562091503268, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI28827793, Length=145, Percent_Identity=39.3103448275862, Blast_Score=80, Evalue=1e-15, Organism=Escherichia coli, GI1786233, Length=162, Percent_Identity=46.2962962962963, Blast_Score=142, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17505899, Length=146, Percent_Identity=32.1917808219178, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI116008026, Length=143, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24647458, Length=143, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 19246; Mature: 19246
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQARPAIEGQAMTPSVALIVAVAANGVIGKDNALPWHIPEDLKWFKENTLGKPVIMGRK CCCCCCCCCCCCCCCHHHHHEEHHCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEEECCH TWESIGRPLPKRPNIVVTRQTGWRAEGAHTAHSLDEALALAARLAPEAAELMVIGGNSLF HHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH AEALPGARRLYLTEIARAYEGDTMFPAFERGLWHEVSRRRNEGDPAFDFVILDRA HHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure MVQARPAIEGQAMTPSVALIVAVAANGVIGKDNALPWHIPEDLKWFKENTLGKPVIMGRK CCCCCCCCCCCCCCCHHHHHEEHHCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEEECCH TWESIGRPLPKRPNIVVTRQTGWRAEGAHTAHSLDEALALAARLAPEAAELMVIGGNSLF HHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH AEALPGARRLYLTEIARAYEGDTMFPAFERGLWHEVSRRRNEGDPAFDFVILDRA HHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]