| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310415
Identifier: 83310415
GI number: 83310415
Start: 1432543
End: 1433520
Strand: Reverse
Name: 83310415
Synonym: amb1316
Alternate gene names: NA
Gene position: 1433520-1432543 (Counterclockwise)
Preceding gene: 83310416
Following gene: 83310413
Centisome position: 28.86
GC content: 67.59
Gene sequence:
>978_bases ATGCCACGGGACGAAGTCAGCGTGACGAAGCCGGAGGGTGCGACCCCCAGGGCGCCCCACAGCCACAATGATGTGGTCCG CGTCATCAACGACACCTTGAAGGGGCGGGTAGCCGATGTCTTCCGCTCGCTGATCCCGGCGTTTGAGGGCACCAAGGGCG ACGAGTTCTACGAACTGGTCATGGCCAATTCCGAGATGCTGCACGGCTGCATCTCTATCTTCAACCGCAACCGCTCGGCC TTCCGCAACCTGCTGGTGGATGCCCGCGGACGCCCGGTGAACGACGATTTCGTGGCGCTGCGCTGCGGCCGCTCGGTGCA CGACGTCATCGCCATGATCGTCCGCACCCACGCCAAGCGCCACTTCAAGGCCACCCTGGGCGGCGATCCCAACGACCCGA CCACCAAGGCCGGGGCCATGTACAAGGCCATCAACGAATACCTGATCCACGACTGGCAGGTGGCGCTGGTGCCCCATTAC GCCCCGCTGCCCCTGGCCAAGGTGCAGGAGATGGGGCCGCGCCTCCTGGACATCCGCGAGGCGGAAATCCTCGATTCCAT CGCCGCCAACGCAGGCGGGGCGTTGCCCGTCCACTCCCCGCGTCCCCCCGCCACCCCCGAACTGCCCCAGCGCGAACAGC AATGGTGGAAGGCGCTCAACGATTCCACGGTGGTCAAGGTCCTGGGGCAGCGCCCCGAATCCGAGACCCGCGAACTGGTC GCCGCCTTGGGCGAGATCAACGAGTTGGTGCACGCCGACCTGTTCGCCCGCCTGGGCCTCAGCACCTTCCAGGCGGCGGT GGCCATGGTCACCGCCTACAAGCTGCTGGGCCGCGCCGGCTTCCGCACCCAGTTCGGCGTTCCCGGCAAGCCCGCCGTGG TGGCCGCCATCGCCCAGCGCCTGGACAAGCGCGAGGTCGGCCCCCACACCGACCTCCGCCTCATGCCTCAGATGATGGAA GCGGCTTTGCGGGGGTAG
Upstream 100 bases:
>100_bases ATAGCGATACAAAGTGCCATAATTTGTGCTTTGCAGCACAGGTGATGTCCCGATAACCTGAGACTGGCGCCGGATTCCCC GGCACCAGGGGCTGCCACAC
Downstream 100 bases:
>100_bases GCGCCGTACCCCGGGCGGGCTATCGCCCGGACCCATCCGGGGCGAGCCCCGGACCCCCTTCTATTTTATTGATAAAAACA AAGGGGGGTCGGGGATCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPRDEVSVTKPEGATPRAPHSHNDVVRVINDTLKGRVADVFRSLIPAFEGTKGDEFYELVMANSEMLHGCISIFNRNRSA FRNLLVDARGRPVNDDFVALRCGRSVHDVIAMIVRTHAKRHFKATLGGDPNDPTTKAGAMYKAINEYLIHDWQVALVPHY APLPLAKVQEMGPRLLDIREAEILDSIAANAGGALPVHSPRPPATPELPQREQQWWKALNDSTVVKVLGQRPESETRELV AALGEINELVHADLFARLGLSTFQAAVAMVTAYKLLGRAGFRTQFGVPGKPAVVAAIAQRLDKREVGPHTDLRLMPQMME AALRG
Sequences:
>Translated_325_residues MPRDEVSVTKPEGATPRAPHSHNDVVRVINDTLKGRVADVFRSLIPAFEGTKGDEFYELVMANSEMLHGCISIFNRNRSA FRNLLVDARGRPVNDDFVALRCGRSVHDVIAMIVRTHAKRHFKATLGGDPNDPTTKAGAMYKAINEYLIHDWQVALVPHY APLPLAKVQEMGPRLLDIREAEILDSIAANAGGALPVHSPRPPATPELPQREQQWWKALNDSTVVKVLGQRPESETRELV AALGEINELVHADLFARLGLSTFQAAVAMVTAYKLLGRAGFRTQFGVPGKPAVVAAIAQRLDKREVGPHTDLRLMPQMME AALRG >Mature_324_residues PRDEVSVTKPEGATPRAPHSHNDVVRVINDTLKGRVADVFRSLIPAFEGTKGDEFYELVMANSEMLHGCISIFNRNRSAF RNLLVDARGRPVNDDFVALRCGRSVHDVIAMIVRTHAKRHFKATLGGDPNDPTTKAGAMYKAINEYLIHDWQVALVPHYA PLPLAKVQEMGPRLLDIREAEILDSIAANAGGALPVHSPRPPATPELPQREQQWWKALNDSTVVKVLGQRPESETRELVA ALGEINELVHADLFARLGLSTFQAAVAMVTAYKLLGRAGFRTQFGVPGKPAVVAAIAQRLDKREVGPHTDLRLMPQMMEA ALRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35774; Mature: 35642
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDEVSVTKPEGATPRAPHSHNDVVRVINDTLKGRVADVFRSLIPAFEGTKGDEFYELV CCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH MANSEMLHGCISIFNRNRSAFRNLLVDARGRPVNDDFVALRCGRSVHDVIAMIVRTHAKR HHCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH HFKATLGGDPNDPTTKAGAMYKAINEYLIHDWQVALVPHYAPLPLAKVQEMGPRLLDIRE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCHHHHHHH AEILDSIAANAGGALPVHSPRPPATPELPQREQQWWKALNDSTVVKVLGQRPESETRELV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHH AALGEINELVHADLFARLGLSTFQAAVAMVTAYKLLGRAGFRTQFGVPGKPAVVAAIAQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH LDKREVGPHTDLRLMPQMMEAALRG HHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PRDEVSVTKPEGATPRAPHSHNDVVRVINDTLKGRVADVFRSLIPAFEGTKGDEFYELV CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH MANSEMLHGCISIFNRNRSAFRNLLVDARGRPVNDDFVALRCGRSVHDVIAMIVRTHAKR HHCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH HFKATLGGDPNDPTTKAGAMYKAINEYLIHDWQVALVPHYAPLPLAKVQEMGPRLLDIRE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCHHHHHHH AEILDSIAANAGGALPVHSPRPPATPELPQREQQWWKALNDSTVVKVLGQRPESETRELV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHH AALGEINELVHADLFARLGLSTFQAAVAMVTAYKLLGRAGFRTQFGVPGKPAVVAAIAQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH LDKREVGPHTDLRLMPQMMEAALRG HHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA