| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is pyrE
Identifier: 83310413
GI number: 83310413
Start: 1430886
End: 1431578
Strand: Reverse
Name: pyrE
Synonym: amb1314
Alternate gene names: 83310413
Gene position: 1431578-1430886 (Counterclockwise)
Preceding gene: 83310415
Following gene: 83310411
Centisome position: 28.82
GC content: 64.79
Gene sequence:
>693_bases ATGGCAACCACCGTTTCCCGCACCCCGGAACAGAAGCAGGCGGCGCTGACCACCGCGCGCATCCTGCTGGAAATCAAGGC GATCAATTTCCGCCCGGAAGAGCCCTACATCCTGACCTCGGGCTGGGCCAGCCCGGTTTACGTGGATTGCCGCAAGGTGA TCTCGTTCCCGCGCGCCCGCACCAAGATCTGCGAATTGATGACCAAGGCCATCATGCGCGAGGTCGGCTATGAATCCGCC GAGGCGGTGGCCGGCGGCGAGACGGCGGGCATCCCCTATGCCGCGTGGATTTCCGACCGCATGGGCCTGCCCATGCTCTA CATCCGCAAGAAGCCCAAGGGCTTTGGCCGCAACGCCCAGATCGAAGGCGACTTCAAGGACGGCGACCGGGTGGTGCTGG TCGAGGACCTGGCGTCGGACGGCGCCTCCAAGGTCAACTTCGTCAACGCGCTGCGCGAAGCCGGCGCCAAGGTCGACCAT TCCTTCGTGGTGTTCTTCTACGGCGTCTTCCCCGGCGCCATGAAGAGCCTGGAAGAGATCGGCGTCGACCTGGGCTATCT GTGCAATTGGTGGGATGTGCTGGAAGTGGTCGAGGAAGAAGGCCAGTTCGACAAGCGCGCCGTCGAGGCCGTCCGCTCCT TCCTCCACGATCCCGTGGGCTGGTCCAGCCTGCACGGTGGCCGCAGCGCCTGA
Upstream 100 bases:
>100_bases GGATCACGTCGGACATTTCAGTTCCCTATTCTGTCTTCTTGCAGGAAAGCGCGATTGTGCCTATAGACCCCCTTATCGGC AAGGCAAGAGGGCTCCCCAC
Downstream 100 bases:
>100_bases GGTGGAAACGTCCCCTGCCGCCTATGGCGGCAGGGTTAGGCCCCTCCCTCCGGGGAATCAGGATATACTCGATGGCCGCG CGGCCTATGCCGCGGAAGGC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MATTVSRTPEQKQAALTTARILLEIKAINFRPEEPYILTSGWASPVYVDCRKVISFPRARTKICELMTKAIMREVGYESA EAVAGGETAGIPYAAWISDRMGLPMLYIRKKPKGFGRNAQIEGDFKDGDRVVLVEDLASDGASKVNFVNALREAGAKVDH SFVVFFYGVFPGAMKSLEEIGVDLGYLCNWWDVLEVVEEEGQFDKRAVEAVRSFLHDPVGWSSLHGGRSA
Sequences:
>Translated_230_residues MATTVSRTPEQKQAALTTARILLEIKAINFRPEEPYILTSGWASPVYVDCRKVISFPRARTKICELMTKAIMREVGYESA EAVAGGETAGIPYAAWISDRMGLPMLYIRKKPKGFGRNAQIEGDFKDGDRVVLVEDLASDGASKVNFVNALREAGAKVDH SFVVFFYGVFPGAMKSLEEIGVDLGYLCNWWDVLEVVEEEGQFDKRAVEAVRSFLHDPVGWSSLHGGRSA >Mature_229_residues ATTVSRTPEQKQAALTTARILLEIKAINFRPEEPYILTSGWASPVYVDCRKVISFPRARTKICELMTKAIMREVGYESAE AVAGGETAGIPYAAWISDRMGLPMLYIRKKPKGFGRNAQIEGDFKDGDRVVLVEDLASDGASKVNFVNALREAGAKVDHS FVVFFYGVFPGAMKSLEEIGVDLGYLCNWWDVLEVVEEEGQFDKRAVEAVRSFLHDPVGWSSLHGGRSA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=206, Percent_Identity=27.1844660194175, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17508631, Length=140, Percent_Identity=33.5714285714286, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17554964, Length=198, Percent_Identity=28.7878787878788, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI17933654, Length=194, Percent_Identity=29.3814432989691, Blast_Score=81, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 25441; Mature: 25310
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTVSRTPEQKQAALTTARILLEIKAINFRPEEPYILTSGWASPVYVDCRKVISFPRAR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHH TKICELMTKAIMREVGYESAEAVAGGETAGIPYAAWISDRMGLPMLYIRKKPKGFGRNAQ HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCE IEGDFKDGDRVVLVEDLASDGASKVNFVNALREAGAKVDHSFVVFFYGVFPGAMKSLEEI ECCCCCCCCEEEEEECHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHH GVDLGYLCNWWDVLEVVEEEGQFDKRAVEAVRSFLHDPVGWSSLHGGRSA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure ATTVSRTPEQKQAALTTARILLEIKAINFRPEEPYILTSGWASPVYVDCRKVISFPRAR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHH TKICELMTKAIMREVGYESAEAVAGGETAGIPYAAWISDRMGLPMLYIRKKPKGFGRNAQ HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCE IEGDFKDGDRVVLVEDLASDGASKVNFVNALREAGAKVDHSFVVFFYGVFPGAMKSLEEI ECCCCCCCCEEEEEECHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHH GVDLGYLCNWWDVLEVVEEEGQFDKRAVEAVRSFLHDPVGWSSLHGGRSA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA