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The map label for this gene is yohK [H]

Identifier: 83310410

GI number: 83310410

Start: 1429362

End: 1430081

Strand: Reverse

Name: yohK [H]

Synonym: amb1311

Alternate gene names: 83310410

Gene position: 1430081-1429362 (Counterclockwise)

Preceding gene: 83310411

Following gene: 83310408

Centisome position: 28.79

GC content: 67.92

Gene sequence:

>720_bases
ATGAGCACCGACCTGTCCAGCATCTGGATCTATCTTTCCACCTCGCCGCTGCTGGGGCTGACCTCGACGCTGATCGCCTA
TCAGGCGGCCATGTGGCTGTTCGAGAAGGGCGGGCGCTCGCCCCTGCTCAACCCCATCCTGGTCTCGGTGGTGATCATCG
TCGGCTTCCTGATGGCCACGGGCACCGAATACCGCACCTATTTCGACGGGGCGCAGTTCGTCCACTTCCTGCTGGGTCCG
GCCACCGTCGCCCTGGCGGTGCCCCTTTACGCCCAGATGCCCATCCTGCGCCGTGCCTGGCCCGCCATCCTGCTGGTGAT
CCTGGTGGGGGCGGTGATGGCCGGAGTCAGCGCCGTGGCGGTGGCCTGGGCGCTGGGCGGGTCGGAGAAGGTGCTGCTGT
CCCTGGCCTCCAAATCGGTGACCATTCCCATCGCCATGGGCATTACCGAGCGCATCGGGGGCATTCCCTCGCTGACCGCC
GTGATGGTCATGCTGACCGGCATTTTCGGCGCGGTGTGCGGCGGCTGGATCCTCGACCTGTTCCGGGTCAAGGATCAGGC
GGCACGCGGTCTGGCGCTGGGCATCGCGTCGCACGGCATCGGCACGGTGCGCGCCTTGCAGATGAGCGAGACGGCGGGCG
CCTTCGGCGGGCTGGCCATCGGGCTGACCGGCCTGATCACCGCCGTGCTGGTGCCGCTGCTGGTGGGGTTACTGCGGTAG

Upstream 100 bases:

>100_bases
CCATCGCGGCGGCGGTGCTGGGCAGCACCTTTGCCACCATCGTGGTGGCGGGACGCCTCATGCAGGCCCTGAGCCGGCGC
CATAAGCCGGAGGCCAAGTG

Downstream 100 bases:

>100_bases
GGCCTTGCGGATGCCGCCCAGGTTCCAGCCCTTGGCGACGTCGCTCAGCACCTCGCTGGTGGCGAGGTTGTCGCCCTCGA
TCTGCAGCAGGACGCGGGGG

Product: putative effector of murein hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSTDLSSIWIYLSTSPLLGLTSTLIAYQAAMWLFEKGGRSPLLNPILVSVVIIVGFLMATGTEYRTYFDGAQFVHFLLGP
ATVALAVPLYAQMPILRRAWPAILLVILVGAVMAGVSAVAVAWALGGSEKVLLSLASKSVTIPIAMGITERIGGIPSLTA
VMVMLTGIFGAVCGGWILDLFRVKDQAARGLALGIASHGIGTVRALQMSETAGAFGGLAIGLTGLITAVLVPLLVGLLR

Sequences:

>Translated_239_residues
MSTDLSSIWIYLSTSPLLGLTSTLIAYQAAMWLFEKGGRSPLLNPILVSVVIIVGFLMATGTEYRTYFDGAQFVHFLLGP
ATVALAVPLYAQMPILRRAWPAILLVILVGAVMAGVSAVAVAWALGGSEKVLLSLASKSVTIPIAMGITERIGGIPSLTA
VMVMLTGIFGAVCGGWILDLFRVKDQAARGLALGIASHGIGTVRALQMSETAGAFGGLAIGLTGLITAVLVPLLVGLLR
>Mature_238_residues
STDLSSIWIYLSTSPLLGLTSTLIAYQAAMWLFEKGGRSPLLNPILVSVVIIVGFLMATGTEYRTYFDGAQFVHFLLGPA
TVALAVPLYAQMPILRRAWPAILLVILVGAVMAGVSAVAVAWALGGSEKVLLSLASKSVTIPIAMGITERIGGIPSLTAV
MVMLTGIFGAVCGGWILDLFRVKDQAARGLALGIASHGIGTVRALQMSETAGAFGGLAIGLTGLITAVLVPLLVGLLR

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=212, Percent_Identity=45.2830188679245, Blast_Score=177, Evalue=7e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24835; Mature: 24704

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDLSSIWIYLSTSPLLGLTSTLIAYQAAMWLFEKGGRSPLLNPILVSVVIIVGFLMAT
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
GTEYRTYFDGAQFVHFLLGPATVALAVPLYAQMPILRRAWPAILLVILVGAVMAGVSAVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAWALGGSEKVLLSLASKSVTIPIAMGITERIGGIPSLTAVMVMLTGIFGAVCGGWILDL
HHHHCCCCHHHHHHHHCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRVKDQAARGLALGIASHGIGTVRALQMSETAGAFGGLAIGLTGLITAVLVPLLVGLLR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
STDLSSIWIYLSTSPLLGLTSTLIAYQAAMWLFEKGGRSPLLNPILVSVVIIVGFLMAT
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
GTEYRTYFDGAQFVHFLLGPATVALAVPLYAQMPILRRAWPAILLVILVGAVMAGVSAVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAWALGGSEKVLLSLASKSVTIPIAMGITERIGGIPSLTAVMVMLTGIFGAVCGGWILDL
HHHHCCCCHHHHHHHHCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRVKDQAARGLALGIASHGIGTVRALQMSETAGAFGGLAIGLTGLITAVLVPLLVGLLR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]