Click here to switch to the map view.

The map label for this gene is spmA [H]

Identifier: 83310408

GI number: 83310408

Start: 1427437

End: 1428672

Strand: Reverse

Name: spmA [H]

Synonym: amb1309

Alternate gene names: 83310408

Gene position: 1428672-1427437 (Counterclockwise)

Preceding gene: 83310410

Following gene: 83310407

Centisome position: 28.76

GC content: 69.82

Gene sequence:

>1236_bases
TTGAACGCCGTATTCCTGGTCCTGGTGCTGGTCTCGTTCCTGGTGGCCGCCTTCGCCGAACTGTCGGGCGGAGCGGGCGC
CATGGAGGCGCTGTCGGCCGGTCTGGTGGATTCGGTGGCGGGCGCCGTGCCCCTGGCCTTGGGACTGGTGGGGATCATGG
CGCTGTTCCTCGGCCTGATGAAGGTGGCCGAGGCCGGCGGCCTGCTCGACATCCTGGCCCGCCTGCTGGAACCGGCGCTG
CGCCGCCTGTTTCCCGAGATTCCCGCCGGGCATCCGGCCATGGGCGCCATGGTGATGAACGTCGCCGCCAACCTGCTGGG
GCTGGGCAATGCCGCCACGCCGTTCGGCATCCGCGCCATGGAGCATCTGGAAAGCCTCAACCGCGACAAGGGCACCGCCA
GCAATGCCCAGGTGCTGTTCCTGGCCATCAATACCGCCGGGCTGACCCTGCTGCCCACCAAGGTCATCGCGCTGCGCGCC
GCCACCGGATCGGCCCAGCCCGCCGCCATCGTCGCCTCGACCCTGATCGCCAGCCTGGTCGCCGCCCTGGTGGGAGTGCT
GGCCGCGCGGGGACTGCAAGGCCTGTGGCAGCCCCGGATGATCGAGACGGTTCCCGATCAGCCCGCTCCCGCTTCGCTGT
GGCCCTGCCTCCTCGCCCTGGCCGGGCTACTGGCCGGCGCGGCGGCGCTGCTGGCCTGGGGCAAGGTTCTGGGGCCGTGG
ATTCTGCCCGGTCTGGTCGTGGGGCTGCTACTGTTCGGCGCCCGCCGGGGCGTGCGTCTCTATGAGAGCTTCGTCGAAGG
CGCCAAAGAGGGCTTCGACGTGGCGGTGCGCATCATCCCCTATCTGGTGGCCATCCTGGCGGCCATCGGCATGGTGCGGG
CCTCGGGGGCCATGGATCTGCTGATCCGCCCCCTGGGACGGCTGACCGAGGGGCTGGGCCTGCCGGCCGAGGCGCTGATG
ATGGCGGCGATGCGCACCCTGTCCGGCTCGGGCTCCTACGGCATGCTGGCGTCCAGCCTGAAGGACCCGGCCATCGGCCC
GGATTCTTATCTGGGCGCCCTGCTGTCGACCCTTTACGGTTCGACGGAAACCACCTTCTACGTCCTGGCCGTCTATTTCG
GGGCGGTGCAGGTGCGGCGCATCCGCCATGCCCTGGCGGTGGGACTGCTGGCCGATCTGGCCGCCCTGATCGCCGCAATC
ATCGTCTGCCGCCTGCTGTTTGGGGGAGTTTCATGA

Upstream 100 bases:

>100_bases
ATGTTTCGCCAAAAGCTTTACAACGGCCAAGGGCAGGCGGCAAGGATGCGCGACGCCGTTCCTTCTGCTAGGTTTTCCCT
GAAGTGGGGGGAACTGCCCG

Downstream 100 bases:

>100_bases
GTCTTGCCGCCGAACTGACCGCGCTGGCCTCGGTCGTGGCCATCGACATCACCCTGGCCGGCGACAATGCCGTGGTGATC
GGCATCGCCGCCGCCGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MNAVFLVLVLVSFLVAAFAELSGGAGAMEALSAGLVDSVAGAVPLALGLVGIMALFLGLMKVAEAGGLLDILARLLEPAL
RRLFPEIPAGHPAMGAMVMNVAANLLGLGNAATPFGIRAMEHLESLNRDKGTASNAQVLFLAINTAGLTLLPTKVIALRA
ATGSAQPAAIVASTLIASLVAALVGVLAARGLQGLWQPRMIETVPDQPAPASLWPCLLALAGLLAGAAALLAWGKVLGPW
ILPGLVVGLLLFGARRGVRLYESFVEGAKEGFDVAVRIIPYLVAILAAIGMVRASGAMDLLIRPLGRLTEGLGLPAEALM
MAAMRTLSGSGSYGMLASSLKDPAIGPDSYLGALLSTLYGSTETTFYVLAVYFGAVQVRRIRHALAVGLLADLAALIAAI
IVCRLLFGGVS

Sequences:

>Translated_411_residues
MNAVFLVLVLVSFLVAAFAELSGGAGAMEALSAGLVDSVAGAVPLALGLVGIMALFLGLMKVAEAGGLLDILARLLEPAL
RRLFPEIPAGHPAMGAMVMNVAANLLGLGNAATPFGIRAMEHLESLNRDKGTASNAQVLFLAINTAGLTLLPTKVIALRA
ATGSAQPAAIVASTLIASLVAALVGVLAARGLQGLWQPRMIETVPDQPAPASLWPCLLALAGLLAGAAALLAWGKVLGPW
ILPGLVVGLLLFGARRGVRLYESFVEGAKEGFDVAVRIIPYLVAILAAIGMVRASGAMDLLIRPLGRLTEGLGLPAEALM
MAAMRTLSGSGSYGMLASSLKDPAIGPDSYLGALLSTLYGSTETTFYVLAVYFGAVQVRRIRHALAVGLLADLAALIAAI
IVCRLLFGGVS
>Mature_411_residues
MNAVFLVLVLVSFLVAAFAELSGGAGAMEALSAGLVDSVAGAVPLALGLVGIMALFLGLMKVAEAGGLLDILARLLEPAL
RRLFPEIPAGHPAMGAMVMNVAANLLGLGNAATPFGIRAMEHLESLNRDKGTASNAQVLFLAINTAGLTLLPTKVIALRA
ATGSAQPAAIVASTLIASLVAALVGVLAARGLQGLWQPRMIETVPDQPAPASLWPCLLALAGLLAGAAALLAWGKVLGPW
ILPGLVVGLLLFGARRGVRLYESFVEGAKEGFDVAVRIIPYLVAILAAIGMVRASGAMDLLIRPLGRLTEGLGLPAEALM
MAAMRTLSGSGSYGMLASSLKDPAIGPDSYLGALLSTLYGSTETTFYVLAVYFGAVQVRRIRHALAVGLLADLAALIAAI
IVCRLLFGGVS

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG0700

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 42041; Mature: 42041

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVFLVLVLVSFLVAAFAELSGGAGAMEALSAGLVDSVAGAVPLALGLVGIMALFLGLM
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVAEAGGLLDILARLLEPALRRLFPEIPAGHPAMGAMVMNVAANLLGLGNAATPFGIRAM
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
EHLESLNRDKGTASNAQVLFLAINTAGLTLLPTKVIALRAATGSAQPAAIVASTLIASLV
HHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH
AALVGVLAARGLQGLWQPRMIETVPDQPAPASLWPCLLALAGLLAGAAALLAWGKVLGPW
HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPGLVVGLLLFGARRGVRLYESFVEGAKEGFDVAVRIIPYLVAILAAIGMVRASGAMDL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LIRPLGRLTEGLGLPAEALMMAAMRTLSGSGSYGMLASSLKDPAIGPDSYLGALLSTLYG
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHC
STETTFYVLAVYFGAVQVRRIRHALAVGLLADLAALIAAIIVCRLLFGGVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAVFLVLVLVSFLVAAFAELSGGAGAMEALSAGLVDSVAGAVPLALGLVGIMALFLGLM
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVAEAGGLLDILARLLEPALRRLFPEIPAGHPAMGAMVMNVAANLLGLGNAATPFGIRAM
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
EHLESLNRDKGTASNAQVLFLAINTAGLTLLPTKVIALRAATGSAQPAAIVASTLIASLV
HHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH
AALVGVLAARGLQGLWQPRMIETVPDQPAPASLWPCLLALAGLLAGAAALLAWGKVLGPW
HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPGLVVGLLLFGARRGVRLYESFVEGAKEGFDVAVRIIPYLVAILAAIGMVRASGAMDL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LIRPLGRLTEGLGLPAEALMMAAMRTLSGSGSYGMLASSLKDPAIGPDSYLGALLSTLYG
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHC
STETTFYVLAVYFGAVQVRRIRHALAVGLLADLAALIAAIIVCRLLFGGVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 1548223; 9384377; 7642500 [H]