| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310328
Identifier: 83310328
GI number: 83310328
Start: 1304880
End: 1305791
Strand: Reverse
Name: 83310328
Synonym: amb1229
Alternate gene names: NA
Gene position: 1305791-1304880 (Counterclockwise)
Preceding gene: 83310329
Following gene: 83310326
Centisome position: 26.29
GC content: 60.31
Gene sequence:
>912_bases TTGAACATGAGCCGCGCGCGGGGAAGCATGCCGATCAATATTTTCCACTATGCCTTCAACGAGTACGCCCCCATTTTCGA GGAAGTCATCGATGCCATGCGCAGCAGCTTTTGCCGCCTTGGCGTCCCGCACCGGTACTCGGTGAACACCTACGACCATC ACGCCTACAACATCCTCGTCGGTCATGTGGCCTTCATGAAGAAAGGGGCCTTTCCCCCGCACCTGCTGGCCAAGACCGCG GTATTCCAACTGGAATCCCTGACGGCCGGAGGCATCCTCGAGATGAATCCGGACTATCTGGAAATCCTGCGCCGCGCCCA CATGGTCTGGGACTATTCGCCGACCAATGTAGCGGTGCTGAAATCACTGGGGCTTTCCAACGTGGTCCATGTCCCGGTGG GCCACGATCCCGTCCTGGAGCGCATCCCGGACCTCCCGCGCAAGGAAATCGATGTCCTGTTTTACGGCAACATGACCGAA CGGCGGCAGATTCTGCTCGATGCCCTGTCCGGCGCCGGCCTCAAGGTGGAGAGGCGCATGGGCCTGTTCGGCCCCAATCG CGACAACCACATCGCCAATGCCAAGGCGGTGATCAACATTCACCAGTTGGAAGGACAGGTCATGGAACAGGTGCGCCTGT CCTATCTGCTGACAAACCACCGCTTCGTCATTTCCGAGGAATCCAGCGATGCGCCGTATGACGGCGGCATCGTCACCGCC CCCTATGACCAGTTGGTGGAGGCGTGCCTGCGCCACCTGCGCCCTTACGACAAGAGTGAATGCGATCGGATCGCGGACCG GGGCCAGTCCATCATCCGCGAGATTCCATTCTGGCGCGGCGTGCGGGATGCCCTGCTCGCCTCGGGGCATTTTCCCTTTC TCGAGCTGGAAAGCCTGGCGAAAGCTCCCTAA
Upstream 100 bases:
>100_bases ATGGGGCGATTCGACGCAGTCCGAAGACCGACGGCACTGCCGGTAGGACGCCGACCGGAGTCGCCTGCCAGGCAAACGCA AGCTATAACGGGGCTGTTCC
Downstream 100 bases:
>100_bases ATCCCCGCGCCAGCCTCGATGATGCCGGTCTGGCGCTCGACCTCCACCAGCAGGGCGTGCAGCTCTGCCTCGGCGAAGCC GTCGCTTTCCAACTGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MNMSRARGSMPINIFHYAFNEYAPIFEEVIDAMRSSFCRLGVPHRYSVNTYDHHAYNILVGHVAFMKKGAFPPHLLAKTA VFQLESLTAGGILEMNPDYLEILRRAHMVWDYSPTNVAVLKSLGLSNVVHVPVGHDPVLERIPDLPRKEIDVLFYGNMTE RRQILLDALSGAGLKVERRMGLFGPNRDNHIANAKAVINIHQLEGQVMEQVRLSYLLTNHRFVISEESSDAPYDGGIVTA PYDQLVEACLRHLRPYDKSECDRIADRGQSIIREIPFWRGVRDALLASGHFPFLELESLAKAP
Sequences:
>Translated_303_residues MNMSRARGSMPINIFHYAFNEYAPIFEEVIDAMRSSFCRLGVPHRYSVNTYDHHAYNILVGHVAFMKKGAFPPHLLAKTA VFQLESLTAGGILEMNPDYLEILRRAHMVWDYSPTNVAVLKSLGLSNVVHVPVGHDPVLERIPDLPRKEIDVLFYGNMTE RRQILLDALSGAGLKVERRMGLFGPNRDNHIANAKAVINIHQLEGQVMEQVRLSYLLTNHRFVISEESSDAPYDGGIVTA PYDQLVEACLRHLRPYDKSECDRIADRGQSIIREIPFWRGVRDALLASGHFPFLELESLAKAP >Mature_303_residues MNMSRARGSMPINIFHYAFNEYAPIFEEVIDAMRSSFCRLGVPHRYSVNTYDHHAYNILVGHVAFMKKGAFPPHLLAKTA VFQLESLTAGGILEMNPDYLEILRRAHMVWDYSPTNVAVLKSLGLSNVVHVPVGHDPVLERIPDLPRKEIDVLFYGNMTE RRQILLDALSGAGLKVERRMGLFGPNRDNHIANAKAVINIHQLEGQVMEQVRLSYLLTNHRFVISEESSDAPYDGGIVTA PYDQLVEACLRHLRPYDKSECDRIADRGQSIIREIPFWRGVRDALLASGHFPFLELESLAKAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34274; Mature: 34274
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMSRARGSMPINIFHYAFNEYAPIFEEVIDAMRSSFCRLGVPHRYSVNTYDHHAYNILV CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHH GHVAFMKKGAFPPHLLAKTAVFQLESLTAGGILEMNPDYLEILRRAHMVWDYSPTNVAVL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHH KSLGLSNVVHVPVGHDPVLERIPDLPRKEIDVLFYGNMTERRQILLDALSGAGLKVERRM HHCCCCCEEEECCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEHHHC GLFGPNRDNHIANAKAVINIHQLEGQVMEQVRLSYLLTNHRFVISEESSDAPYDGGIVTA CCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEC PYDQLVEACLRHLRPYDKSECDRIADRGQSIIREIPFWRGVRDALLASGHFPFLELESLA CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHCCCCCCEEHHHHH KAP CCC >Mature Secondary Structure MNMSRARGSMPINIFHYAFNEYAPIFEEVIDAMRSSFCRLGVPHRYSVNTYDHHAYNILV CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHH GHVAFMKKGAFPPHLLAKTAVFQLESLTAGGILEMNPDYLEILRRAHMVWDYSPTNVAVL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHH KSLGLSNVVHVPVGHDPVLERIPDLPRKEIDVLFYGNMTERRQILLDALSGAGLKVERRM HHCCCCCEEEECCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEHHHC GLFGPNRDNHIANAKAVINIHQLEGQVMEQVRLSYLLTNHRFVISEESSDAPYDGGIVTA CCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEC PYDQLVEACLRHLRPYDKSECDRIADRGQSIIREIPFWRGVRDALLASGHFPFLELESLA CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHCCCCCCEEHHHHH KAP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA