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The map label for this gene is yajR [C]

Identifier: 83310303

GI number: 83310303

Start: 1276617

End: 1277828

Strand: Reverse

Name: yajR [C]

Synonym: amb1204

Alternate gene names: 83310303

Gene position: 1277828-1276617 (Counterclockwise)

Preceding gene: 83310304

Following gene: 83310302

Centisome position: 25.73

GC content: 66.01

Gene sequence:

>1212_bases
ATGAACGAACCATCCGTTGTTCCCGGAGATCAGGCCGGTTCTGGCCTGCCTGCGCAAGCCATTCCCAAGGGCGTCTGGGC
ACTAGGCTTCGTCAGCCTGCTGATGGACACCTCGTCGGAGATGATCCACAGCCTGCTGCCGGTGTTCCTGACCTCGGTGC
TGGGCGTCAGCGCCCTGTCGATCGGCATCATCGAAGGTATCGCCGAGGCGATTGCGGCCATCACCAAGGTGTTCTCCGGC
GCGATCAGCGATTGGGCGGGCAAGCGCAAGCCGCTGGTGCTGTTCGGCTATGGCCTCGCCGCCCTGACCAAGCCGGTGTT
CGCCCTGGCTCCCTCATTGGGCTGGGTGATCACCGCCCGTTTTGCCGACCGTTTGGGCAAGGGCATCCGGGGGGCGCCCC
GTGACGCCCTGGTGGCCGACCTGACGCCGCCGCATCTGATGGGAGCCGCTTTCGGGTTGCGTCAGTCGCTCGATACGGTA
GGAGCCTTCGCCGGGCCGATCATCGCCATCCTGGTGATGGGGCTGACCAGTGACGACTACCGGCTGTTATTCTGGATCGC
CACCATCCCGGCGCTGCTGGCGGTGCTGTTGATCGTCTTCGGCATTCGGGAACCTACCACCCACAAGGGGGCGGCCAAGG
CCCGCCTGTCCTGGGCCGAGGTCAAGCGATTTCCCCTGGCCTATTGGGTGGTAGTCGCCATTGCCATGCTGATGACTCTG
GCCCGATTCAGCGAGGGCTTCCTGCTGCTGCGGGCGCAGTCGGTCGGGCTGCAAGCCGCTTTGGTGCCGCTGGTCTTCGT
CGCCATGAACATCGTCTATGCCGCAAGCTCCTATCCGGTCGGCCATCTGTCCGACCGGCTGGGGCGGCGTGGGCTGCTGC
TGGGCGGTTTCTCTGTCCTGATCGTCGCCGATCTGGTGCTGGCCCAGGCCAGCGGCATTGCCCAGGTCATGGTGGGCGTG
GCGCTATGGGGGCTGCACATGGGCATGACCCAGGGGCTGCTCGCCACCCTGGTTGCCGACACCGCCCCGGCCAGCTTGCG
CGGCACCGCCTTCGGCGTGTTCAATCTGGCGTCCGGCATCGCCCTGTTGTTCGCCAGCGTGATCGCGGGCTGGCTATGGA
CCGTCATCGGTCCATCGGCAACCTTCCAGGCGGGAGCAGCCTTCACCGCCATCGCCGTCGTGGCCCTGCTGTTCTGGCGG
GGAGATCGATGA

Upstream 100 bases:

>100_bases
CGCTGATCGGCGGACTTAATCTTACCGGTGCGGTGGGCGTCATGGCGCAGGCTTCGCGTGAAATACGCCGCACCACCCCT
GCCACTGGATAATCAAGGCA

Downstream 100 bases:

>100_bases
TGATGGCGCAACGGAATATTCCGTCATTCTAATGAATTGTGGTGCCCGTCGTGCTATGGTTTGCGACAGCAAACAGGAGT
GTTCGATGCTGGCTGCCGTG

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNEPSVVPGDQAGSGLPAQAIPKGVWALGFVSLLMDTSSEMIHSLLPVFLTSVLGVSALSIGIIEGIAEAIAAITKVFSG
AISDWAGKRKPLVLFGYGLAALTKPVFALAPSLGWVITARFADRLGKGIRGAPRDALVADLTPPHLMGAAFGLRQSLDTV
GAFAGPIIAILVMGLTSDDYRLLFWIATIPALLAVLLIVFGIREPTTHKGAAKARLSWAEVKRFPLAYWVVVAIAMLMTL
ARFSEGFLLLRAQSVGLQAALVPLVFVAMNIVYAASSYPVGHLSDRLGRRGLLLGGFSVLIVADLVLAQASGIAQVMVGV
ALWGLHMGMTQGLLATLVADTAPASLRGTAFGVFNLASGIALLFASVIAGWLWTVIGPSATFQAGAAFTAIAVVALLFWR
GDR

Sequences:

>Translated_403_residues
MNEPSVVPGDQAGSGLPAQAIPKGVWALGFVSLLMDTSSEMIHSLLPVFLTSVLGVSALSIGIIEGIAEAIAAITKVFSG
AISDWAGKRKPLVLFGYGLAALTKPVFALAPSLGWVITARFADRLGKGIRGAPRDALVADLTPPHLMGAAFGLRQSLDTV
GAFAGPIIAILVMGLTSDDYRLLFWIATIPALLAVLLIVFGIREPTTHKGAAKARLSWAEVKRFPLAYWVVVAIAMLMTL
ARFSEGFLLLRAQSVGLQAALVPLVFVAMNIVYAASSYPVGHLSDRLGRRGLLLGGFSVLIVADLVLAQASGIAQVMVGV
ALWGLHMGMTQGLLATLVADTAPASLRGTAFGVFNLASGIALLFASVIAGWLWTVIGPSATFQAGAAFTAIAVVALLFWR
GDR
>Mature_403_residues
MNEPSVVPGDQAGSGLPAQAIPKGVWALGFVSLLMDTSSEMIHSLLPVFLTSVLGVSALSIGIIEGIAEAIAAITKVFSG
AISDWAGKRKPLVLFGYGLAALTKPVFALAPSLGWVITARFADRLGKGIRGAPRDALVADLTPPHLMGAAFGLRQSLDTV
GAFAGPIIAILVMGLTSDDYRLLFWIATIPALLAVLLIVFGIREPTTHKGAAKARLSWAEVKRFPLAYWVVVAIAMLMTL
ARFSEGFLLLRAQSVGLQAALVPLVFVAMNIVYAASSYPVGHLSDRLGRRGLLLGGFSVLIVADLVLAQASGIAQVMVGV
ALWGLHMGMTQGLLATLVADTAPASLRGTAFGVFNLASGIALLFASVIAGWLWTVIGPSATFQAGAAFTAIAVVALLFWR
GDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=409, Percent_Identity=25.6723716381418, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42066; Mature: 42066

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPSVVPGDQAGSGLPAQAIPKGVWALGFVSLLMDTSSEMIHSLLPVFLTSVLGVSALS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
IGIIEGIAEAIAAITKVFSGAISDWAGKRKPLVLFGYGLAALTKPVFALAPSLGWVITAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHH
FADRLGKGIRGAPRDALVADLTPPHLMGAAFGLRQSLDTVGAFAGPIIAILVMGLTSDDY
HHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLLFWIATIPALLAVLLIVFGIREPTTHKGAAKARLSWAEVKRFPLAYWVVVAIAMLMTL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFSEGFLLLRAQSVGLQAALVPLVFVAMNIVYAASSYPVGHLSDRLGRRGLLLGGFSVL
HHHCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHH
IVADLVLAQASGIAQVMVGVALWGLHMGMTQGLLATLVADTAPASLRGTAFGVFNLASGI
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALLFASVIAGWLWTVIGPSATFQAGAAFTAIAVVALLFWRGDR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEPSVVPGDQAGSGLPAQAIPKGVWALGFVSLLMDTSSEMIHSLLPVFLTSVLGVSALS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
IGIIEGIAEAIAAITKVFSGAISDWAGKRKPLVLFGYGLAALTKPVFALAPSLGWVITAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHH
FADRLGKGIRGAPRDALVADLTPPHLMGAAFGLRQSLDTVGAFAGPIIAILVMGLTSDDY
HHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLLFWIATIPALLAVLLIVFGIREPTTHKGAAKARLSWAEVKRFPLAYWVVVAIAMLMTL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFSEGFLLLRAQSVGLQAALVPLVFVAMNIVYAASSYPVGHLSDRLGRRGLLLGGFSVL
HHHCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHH
IVADLVLAQASGIAQVMVGVALWGLHMGMTQGLLATLVADTAPASLRGTAFGVFNLASGI
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALLFASVIAGWLWTVIGPSATFQAGAAFTAIAVVALLFWRGDR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]