| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310041
Identifier: 83310041
GI number: 83310041
Start: 1007200
End: 1008204
Strand: Reverse
Name: 83310041
Synonym: amb0943
Alternate gene names: NA
Gene position: 1008204-1007200 (Counterclockwise)
Preceding gene: 83310043
Following gene: 83310034
Centisome position: 20.3
GC content: 62.29
Gene sequence:
>1005_bases ATGGCTGTCCTGGTTTATCACTTCTTCATCAAGGCGGTGGGGATCTTGTTGTTTGCGGTGGAAATAGGATGGTTCGTGTT TCTGCCGTTCTGGAACGAGGCCAAGGAGTGGTGGAAACGTCGCGAAACCATCGGACGGTCACGGCGGTCCTTGCTGCCGG TGGGGTTCTTTGTTGCCACGCTTGTCCTGGCCCTGGTCCCGTGGCGCGCCCATGTCAGCGCGCCTGCCGTCATGAAAGCG GAACGCCATCTGGAGCTTTATGCCGCCAGCCCGGCCCGGATTGAACGCATCTTGATGGTGGAGGGAAGGCAGGTCGCCGA GGGTGAGTCCTTGGCGCTGCTATCCTCCCCCGATCTTGAGTATCGCCTGGCCCAGGTGGAGCGGCGAATCCTGGTCCTGG AATACGAACTGGCGTCGTTCTCATTCGATGCATCTTTCCGCGAGCGGTCCCAGGCCCTGCGCGAGGAATTGGAAACCGCC ATCGCCGAGCGGGTCTCATTGCAGCGGGAGTTGGCCCGGCTTTCCGTCACAGCCCCCATGGCGGGCAGGGTCGTGGATAT GATTCCCGATCTTCAGATCGGGCAGTGGATTTCTCCCAGGGAGCGCCTTGCCCAACTGGCAGGGACCGGAGCCTTGGCGG TCGAAGCCTTCGTGGCCGAAAGCGATGTGGGAAGACTTCGCATTGGGAACGAGGGGCGGTTTGTTGCCGATGACCCGGGC CGCCCCGACCTGCCGTGCAGGATTGCTACCATCGACAGCGGGGCCATCCGCAGCCTGACGGAACCGGTGCTTGCCTCGGT GGCTGGCGGCCCGATTCAAGTTCGCGCCAAGGACAAGTCATTGGTTCCCGATCAGGCCCTGTACCGGATTCGCTGTGTCG GCACCATCCCTGCACAGGCCACCCAGTTGCGAGGAATGGCTGTCCTGAAGGCCGAGCCGGAAAGTATAGCGGGTTTCATC CTGCGATCGGCAGCCGCGGCTCTGCTGCGGGAAAGCGGAATGTGA
Upstream 100 bases:
>100_bases ATCCCGCCCCTGTGGCTCACGTCGCTGTGTCGAGCGTGGCTGTCCCAGCACCAGGCAAGTCCGGCGCTCCTCTTTCTGTG CATTCGAGGCATTGGCGGTC
Downstream 100 bases:
>100_bases TGGAAATACGCGGTCGCCGTAACGGTACGGGAGGCAACGGAGGCTTTCAGCCGTGCCTCTTTGGCGGAACGGTCCCGCAG CGATTGGTAATTCTGCCGCT
Product: membrane-fusion protein
Products: NA
Alternate protein names: Membrane-Fusion Protein; Peptidase; Peptidase Family M; HlyD Domain-Containing Protein; Zinc Metallopeptidase; Membrane Zinc Metallopeptidase; M50 Family Peptidase; Zn-Dependent Protease
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVATLVLALVPWRAHVSAPAVMKA ERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLEYRLAQVERRILVLEYELASFSFDASFRERSQALREELETA IAERVSLQRELARLSVTAPMAGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQATQLRGMAVLKAEPESIAGFI LRSAAAALLRESGM
Sequences:
>Translated_334_residues MAVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVATLVLALVPWRAHVSAPAVMKA ERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLEYRLAQVERRILVLEYELASFSFDASFRERSQALREELETA IAERVSLQRELARLSVTAPMAGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQATQLRGMAVLKAEPESIAGFI LRSAAAALLRESGM >Mature_333_residues AVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVATLVLALVPWRAHVSAPAVMKAE RHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLEYRLAQVERRILVLEYELASFSFDASFRERSQALREELETAI AERVSLQRELARLSVTAPMAGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPGR PDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQATQLRGMAVLKAEPESIAGFIL RSAAAALLRESGM
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36883; Mature: 36752
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVAT CEEHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LVLALVPWRAHVSAPAVMKAERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLE HHHHHCCHHHCCCCCHHHHHHHCEEEEECCHHHHHEEEEECCCEECCCCCEEEECCCCHH YRLAQVERRILVLEYELASFSFDASFRERSQALREELETAIAERVSLQRELARLSVTAPM HHHHHHHCEEEEEEEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC AGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG CCHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCC RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQA CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHEEEEEEECCCCHH TQLRGMAVLKAEPESIAGFILRSAAAALLRESGM HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVAT EEHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LVLALVPWRAHVSAPAVMKAERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLE HHHHHCCHHHCCCCCHHHHHHHCEEEEECCHHHHHEEEEECCCEECCCCCEEEECCCCHH YRLAQVERRILVLEYELASFSFDASFRERSQALREELETAIAERVSLQRELARLSVTAPM HHHHHHHCEEEEEEEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC AGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG CCHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCC RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQA CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHEEEEEEECCCCHH TQLRGMAVLKAEPESIAGFILRSAAAALLRESGM HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA