| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310028
Identifier: 83310028
GI number: 83310028
Start: 996961
End: 997485
Strand: Reverse
Name: 83310028
Synonym: amb0929
Alternate gene names: NA
Gene position: 997485-996961 (Counterclockwise)
Preceding gene: 83310029
Following gene: 83310024
Centisome position: 20.08
GC content: 62.29
Gene sequence:
>525_bases GTGAGGCCCGCCGCCAAGCGAGAAGCTGTCGCCCATCTGCGAAGCCAATTCGAGATGAGCGAGCGTCGGGCCTGTGCGGT GATCGCGGCGGATCGCACCATGATCCGCTACCGTTCGGTTTGGCCCGACGACAAAGCGCAGCGGATTGCCCAAGGCATCG ACGATGGCGTGGATCTTGGTGGTCAGCCCGCCGCGCGAACGCCCGATCGCACGAGCTTCAGGCCCCCTTTTTTGCCCGCC GCATGTTGGTGCGCCCGGACGATGGTCGAGTCGATCATGACGTATTCGAAGTCGGGGTCGTCAGCCATCATGGCGAAAAG CCGATCCCATACACCGTCCTTGGACCAGCGGGAAAAACGGATGAACGCGCTGTTCCAATTGCCGAAAAAATTCGGCAGAT CACGCCAAGGCGAACCCGTTCGGGCCAGCCATAGCACAGCTTCCAGGAAAAGGCGGTTATCCGCACCAGTCCTGCCGGGA TCGCTGCGCTTGCCCGGCAAATGCGGCGCCATCCGATCCCACTGA
Upstream 100 bases:
>100_bases GGCTGAAAGCGCTTGAGGACGAGAACGCCCAGCTGAAGAAGCTGCTGGCGGAATCCATGCTGAACGAGGCCGCGCTCCGC GATCTGCTGGGAAAAAAATG
Downstream 100 bases:
>100_bases TGATCCTTTAAGATCAAACGGACCCCGCTCATTCAAGCCTCCTTCTCGAAAAGGAGTTTGAATCAGATTTTGGGGGCCGT GGGAATCTGGAGGGTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRPAAKREAVAHLRSQFEMSERRACAVIAADRTMIRYRSVWPDDKAQRIAQGIDDGVDLGGQPAARTPDRTSFRPPFLPA ACWCARTMVESIMTYSKSGSSAIMAKSRSHTPSLDQREKRMNALFQLPKKFGRSRQGEPVRASHSTASRKRRLSAPVLPG SLRLPGKCGAIRSH
Sequences:
>Translated_174_residues MRPAAKREAVAHLRSQFEMSERRACAVIAADRTMIRYRSVWPDDKAQRIAQGIDDGVDLGGQPAARTPDRTSFRPPFLPA ACWCARTMVESIMTYSKSGSSAIMAKSRSHTPSLDQREKRMNALFQLPKKFGRSRQGEPVRASHSTASRKRRLSAPVLPG SLRLPGKCGAIRSH >Mature_174_residues MRPAAKREAVAHLRSQFEMSERRACAVIAADRTMIRYRSVWPDDKAQRIAQGIDDGVDLGGQPAARTPDRTSFRPPFLPA ACWCARTMVESIMTYSKSGSSAIMAKSRSHTPSLDQREKRMNALFQLPKKFGRSRQGEPVRASHSTASRKRRLSAPVLPG SLRLPGKCGAIRSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19317; Mature: 19317
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAAKREAVAHLRSQFEMSERRACAVIAADRTMIRYRSVWPDDKAQRIAQGIDDGVDLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCC GQPAARTPDRTSFRPPFLPAACWCARTMVESIMTYSKSGSSAIMAKSRSHTPSLDQREKR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH MNALFQLPKKFGRSRQGEPVRASHSTASRKRRLSAPVLPGSLRLPGKCGAIRSH HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRPAAKREAVAHLRSQFEMSERRACAVIAADRTMIRYRSVWPDDKAQRIAQGIDDGVDLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCC GQPAARTPDRTSFRPPFLPAACWCARTMVESIMTYSKSGSSAIMAKSRSHTPSLDQREKR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH MNALFQLPKKFGRSRQGEPVRASHSTASRKRRLSAPVLPGSLRLPGKCGAIRSH HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA