Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310013

Identifier: 83310013

GI number: 83310013

Start: 983206

End: 983484

Strand: Reverse

Name: 83310013

Synonym: amb0914

Alternate gene names: NA

Gene position: 983484-983206 (Counterclockwise)

Preceding gene: 83310014

Following gene: 83310012

Centisome position: 19.8

GC content: 60.93

Gene sequence:

>279_bases
ATGCCGAAGAAGAGACATACCGCCGAAGAGATCATCGGCAAGCTGCGTGAAGCGGACGTGCTTCTGGCGCAAGGCCGGAA
GGTGGCCGACGTCGCCAAGGCGCTGTCGGTGACGGAAGTGACGTACTACCGCTGGCGCCAGGAATACGGAGGGATGAAGG
TCTCTCAGGCCAAGCGGCTCAAGGAGCTTGAGCGCGAGAACGATCGGCTGCGCAAGGCGGTGGCTGACCTGACCATCGAC
AAGCTGATTTTGAAGGAGGCCGCCTGGGGAAACTTCTGA

Upstream 100 bases:

>100_bases
AATTCATCCGGCTATTTCCAAAGCCCGATAGACGGATTGCCCCCCGTGAATGGCTCCATGTTGAATGTAATAATTCAACT
GACCATGAAGGGGACATTCC

Downstream 100 bases:

>100_bases
GCCCCGCCCGTCGCCGGTGTTGCATCATGGCGGTGTGCGAGCGGTTGGCGGTGTCGGAGCGCCGGGCTTGCCTGGTGTTG
GGACAGCCCCGCTCGCCGAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MPKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRLKELERENDRLRKAVADLTID
KLILKEAAWGNF

Sequences:

>Translated_92_residues
MPKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRLKELERENDRLRKAVADLTID
KLILKEAAWGNF
>Mature_91_residues
PKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRLKELERENDRLRKAVADLTIDK
LILKEAAWGNF

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10613; Mature: 10482

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRL
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KELERENDRLRKAVADLTIDKLILKEAAWGNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRL
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KELERENDRLRKAVADLTIDKLILKEAAWGNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]