| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yeeE [H]
Identifier: 83309956
GI number: 83309956
Start: 916757
End: 917887
Strand: Reverse
Name: yeeE [H]
Synonym: amb0857
Alternate gene names: 83309956
Gene position: 917887-916757 (Counterclockwise)
Preceding gene: 83309958
Following gene: 83309955
Centisome position: 18.48
GC content: 69.58
Gene sequence:
>1131_bases ATGAACCCCATCAGACTTGGCGGAGACAGCCCCTTGTCCGAGATCGCCCTTACCACCCTCGTCGGCTCGGCCGGTTTCGC CGTGGGCGCAGTGTTCGGCTGGGCGGCGCGGGCCAGCGACTTCTGCACCATGGGAGCCCTGTCCGACATGGTGTTCCTGG GCGACCGGCGGCGGCTGCGGGCCTGGGTTCTGGCCATGGCGGTGGCCCTGCTGGGATCGCAGGCCTTGCAGGCGGGCGGA TGGATCAATCTGGACAAGTCCATCTATCTGGGCGCCTCCCTCCCCTGGGCCGGGGCCATCCTGGGCGGGCTGATGTTCGG CTATGGCATGACCCTGGCGGGCGGTTGCGGCAGCAAGACCCTGGTGCGGCTGGGCGGCGGCAATCTCAAATCCCTGGTGG TGGTGCTGGTGACCGGCCTGTTCGCCACCATGACCCTGAAGGGCCTGCTGGCCATGGAGCGCATCGCCCTGGAACAGGCG ACCAATATCGCCGCGACCCGGCTGGGCGCCAGCGGCCAGAGCCTGCCGGCCCTGCTGGCCGGATGGGGCCTCCCCGAAGC CGTCGGCCGCCCTCTTGCCGTCGCCGTTCTGGCCGGTGGCGCCCTGATCTGGTGTCTCAAGGATGCCGCCTTCCGGACGG CGGGGAGTACGCTGGCCGGCGCCCTGGTGATCGGCCTGACCGTTCCCGCCGGCTGGGCCGTCACCGGCATCCTGGGCGCC GACGATTTCGACCCGGTGCAACTGACCTCGCTGTCGTTCATCTCGCCCATGGGCGACGGACTGATGTACCTGATGACCTA TACCGGCGCGACCATCAGCTTCGGCGTGGCGGCGGTAGGCGGCATCGTCGCCGGCTCGTTCCTGGCGGCCCGCCTGGGGG GCAGCTTCGCCCTGGAAGGCTTCGCCGATACCGCCGACCTGCTCCGCCATCTGGGTGGTGCCGCGCTGATGGGCATCGGC GGCATCATGGCCATGGGCTGCACCATCGGCCAAGGACTGACCGGTCTGTCGACCTTGTCGGCCACCTCGTTCCTGGCCCT GGCCTCGATCATCCTGGGCGGCGTCATTGGCCTGCGCAGCCTGGACGAAGGCGGTCTGCGCGGTGGCCTCCGGTCCTTTC TGTCCCGCTGA
Upstream 100 bases:
>100_bases TCGTCTCAGCGGGCTGGCTCGCCCTGTTGATATGAGGCTACACTAATATTAGCCCATATCCCAGTCCATTGATGCCATCG CCTTGCCGGTGATAGCCTGG
Downstream 100 bases:
>100_bases ATATCATAATATTATGATATATCGGTTGCGCCGTCTCGCCCGCCTCCGCTACCATGAAAGAAAAAACATTCCTGGGGAGG AGAGGGACGTGGACGCATCC
Product: transporter component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MNPIRLGGDSPLSEIALTTLVGSAGFAVGAVFGWAARASDFCTMGALSDMVFLGDRRRLRAWVLAMAVALLGSQALQAGG WINLDKSIYLGASLPWAGAILGGLMFGYGMTLAGGCGSKTLVRLGGGNLKSLVVVLVTGLFATMTLKGLLAMERIALEQA TNIAATRLGASGQSLPALLAGWGLPEAVGRPLAVAVLAGGALIWCLKDAAFRTAGSTLAGALVIGLTVPAGWAVTGILGA DDFDPVQLTSLSFISPMGDGLMYLMTYTGATISFGVAAVGGIVAGSFLAARLGGSFALEGFADTADLLRHLGGAALMGIG GIMAMGCTIGQGLTGLSTLSATSFLALASIILGGVIGLRSLDEGGLRGGLRSFLSR
Sequences:
>Translated_376_residues MNPIRLGGDSPLSEIALTTLVGSAGFAVGAVFGWAARASDFCTMGALSDMVFLGDRRRLRAWVLAMAVALLGSQALQAGG WINLDKSIYLGASLPWAGAILGGLMFGYGMTLAGGCGSKTLVRLGGGNLKSLVVVLVTGLFATMTLKGLLAMERIALEQA TNIAATRLGASGQSLPALLAGWGLPEAVGRPLAVAVLAGGALIWCLKDAAFRTAGSTLAGALVIGLTVPAGWAVTGILGA DDFDPVQLTSLSFISPMGDGLMYLMTYTGATISFGVAAVGGIVAGSFLAARLGGSFALEGFADTADLLRHLGGAALMGIG GIMAMGCTIGQGLTGLSTLSATSFLALASIILGGVIGLRSLDEGGLRGGLRSFLSR >Mature_376_residues MNPIRLGGDSPLSEIALTTLVGSAGFAVGAVFGWAARASDFCTMGALSDMVFLGDRRRLRAWVLAMAVALLGSQALQAGG WINLDKSIYLGASLPWAGAILGGLMFGYGMTLAGGCGSKTLVRLGGGNLKSLVVVLVTGLFATMTLKGLLAMERIALEQA TNIAATRLGASGQSLPALLAGWGLPEAVGRPLAVAVLAGGALIWCLKDAAFRTAGSTLAGALVIGLTVPAGWAVTGILGA DDFDPVQLTSLSFISPMGDGLMYLMTYTGATISFGVAAVGGIVAGSFLAARLGGSFALEGFADTADLLRHLGGAALMGIG GIMAMGCTIGQGLTGLSTLSATSFLALASIILGGVIGLRSLDEGGLRGGLRSFLSR
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=344, Percent_Identity=27.906976744186, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 37732; Mature: 37732
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIRLGGDSPLSEIALTTLVGSAGFAVGAVFGWAARASDFCTMGALSDMVFLGDRRRLR CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH AWVLAMAVALLGSQALQAGGWINLDKSIYLGASLPWAGAILGGLMFGYGMTLAGGCGSKT HHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCE LVRLGGGNLKSLVVVLVTGLFATMTLKGLLAMERIALEQATNIAATRLGASGQSLPALLA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH GWGLPEAVGRPLAVAVLAGGALIWCLKDAAFRTAGSTLAGALVIGLTVPAGWAVTGILGA CCCCHHHHCCCCEEHHHHCCHHEEEHHHHHHHHCCHHHHHHHHEEEECCCCHHEEEECCC DDFDPVQLTSLSFISPMGDGLMYLMTYTGATISFGVAAVGGIVAGSFLAARLGGSFALEG CCCCCEEEHHHHHHCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC FADTADLLRHLGGAALMGIGGIMAMGCTIGQGLTGLSTLSATSFLALASIILGGVIGLRS CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LDEGGLRGGLRSFLSR CCCCHHHHHHHHHHCC >Mature Secondary Structure MNPIRLGGDSPLSEIALTTLVGSAGFAVGAVFGWAARASDFCTMGALSDMVFLGDRRRLR CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH AWVLAMAVALLGSQALQAGGWINLDKSIYLGASLPWAGAILGGLMFGYGMTLAGGCGSKT HHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCE LVRLGGGNLKSLVVVLVTGLFATMTLKGLLAMERIALEQATNIAATRLGASGQSLPALLA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH GWGLPEAVGRPLAVAVLAGGALIWCLKDAAFRTAGSTLAGALVIGLTVPAGWAVTGILGA CCCCHHHHCCCCEEHHHHCCHHEEEHHHHHHHHCCHHHHHHHHEEEECCCCHHEEEECCC DDFDPVQLTSLSFISPMGDGLMYLMTYTGATISFGVAAVGGIVAGSFLAARLGGSFALEG CCCCCEEEHHHHHHCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC FADTADLLRHLGGAALMGIGGIMAMGCTIGQGLTGLSTLSATSFLALASIILGGVIGLRS CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LDEGGLRGGLRSFLSR CCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]