Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is thrB

Identifier: 83309862

GI number: 83309862

Start: 819536

End: 820516

Strand: Reverse

Name: thrB

Synonym: amb0763

Alternate gene names: 83309862

Gene position: 820516-819536 (Counterclockwise)

Preceding gene: 83309863

Following gene: 83309861

Centisome position: 16.52

GC content: 66.06

Gene sequence:

>981_bases
ATGGCCGTCTACACCGAGGTATCCGACGACGAACTGGAAGACTTCGCCGCCGAATACGACATCGGTCAGGTGGTATCGTG
CAAGGGCATCGCCGAGGGCGTCGAAAATACCAATTACCTGCTGCAGACCGACCAGGGGAACTACATCCTCACCCTCTACG
AGAAGCGGGTGAACCCGGAGGAGCTGCCGTTCTTCCTGGGCCTGATGGAGCATCTGGCCGCCCACGGCCTAGCCTGCCCC
ACACCCATCCATGGCCGCGACGGCAAGGCGCTGCGCACGCTGTGCGGCCGCCCGGCGGCCATCGTCAGCTTCCTCAAGGG
CATGTGGAGCCGCCGCATCACCCTCGGCCACTGCGCCGAGCTGGGTCCGGCCATGGCCACCATGCACCTGGCGGGTGCCG
ATTTTCCCCTGACCCGGGCCAACAACCTGTCGGTCGCCGGCTGGCGGCCACTGTTCGAGTCCATCCGGCCCCGCGCCGCC
GAGATCAAGTCGGATCTGGCGCAGAGCATCGAGGACGAACTGGACTACCTGGAGGCCCACTGGCCCAGGACCCTGCCGGT
GGGGCTGATCCACGCCGACCTGTTTCCCGACAACGTATTCTTCCTGGCCGACAAGGCGGCGGGCGTCGACCGCATGTCGG
GCTTCATCGATTTCTACTTCGCCTGCACCGATGTGCTGGCCTACGACATCGCCATCTGCCTCAACGCCTGGTGCTTCGAG
GAGGATGGCGCCTTCAACGCCACCAAGGCCCGCCTGATGCTCAACGGCTATCGCCGGGTGCGTCCGCTGTCGGCCGATGA
GCTGGACGCCCTGCCGCTGCTGGCCCGCGGCGCAGCCATGCGTTTCCTGCTGACGCGCAGCTACGACTGGTTGCACACCC
CGCCCGGCGCCATGGTCAAGCGCAAGGACCCCATGGAATATTACCGCAAGCTCCGCTTCCACCAGGGCGTCACCGGCCCG
GGCCAGTACGGCATCGAATGA

Upstream 100 bases:

>100_bases
CCTTGGGACATGGGGAAAGCCGCCTCTCTCCGCTGGCATCATCGGCGGAAACATCGTACCTTCCGCCCAATTCCCCCCCC
CTGGACCAAGTCGAGAGAGC

Downstream 100 bases:

>100_bases
GCGAGACAGCTCCCAAGCCCGAGACCGTCGAGATCTATACCGACGGCGCCTGTTCCGGCAATCCCGGCCCCGGCGGCTGG
GGCGCCATCCTGCGCTTCAA

Product: homoserine kinase

Products: NA

Alternate protein names: HK; HSK

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MAVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPEELPFFLGLMEHLAAHGLACP
TPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAELGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAA
EIKSDLAQSIEDELDYLEAHWPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE
EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVKRKDPMEYYRKLRFHQGVTGP
GQYGIE

Sequences:

>Translated_326_residues
MAVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPEELPFFLGLMEHLAAHGLACP
TPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAELGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAA
EIKSDLAQSIEDELDYLEAHWPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE
EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVKRKDPMEYYRKLRFHQGVTGP
GQYGIE
>Mature_325_residues
AVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPEELPFFLGLMEHLAAHGLACPT
PIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAELGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAAE
IKSDLAQSIEDELDYLEAHWPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFEE
DGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVKRKDPMEYYRKLRFHQGVTGPG
QYGIE

Specific function: Unknown

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudomonas-type thrB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KHSE_MAGSA (Q2W9A8)

Other databases:

- EMBL:   AP007255
- RefSeq:   YP_420126.1
- ProteinModelPortal:   Q2W9A8
- SMR:   Q2W9A8
- STRING:   Q2W9A8
- GeneID:   3806330
- GenomeReviews:   AP007255_GR
- KEGG:   mag:amb0763
- NMPDR:   fig|342108.5.peg.717
- eggNOG:   COG2334
- HOGENOM:   HBG309377
- OMA:   ADLFRDN
- ProtClustDB:   PRK05231
- BioCyc:   MMAG342108:AMB0763-MONOMER
- HAMAP:   MF_00301
- InterPro:   IPR002575
- InterPro:   IPR005280
- InterPro:   IPR011009
- TIGRFAMs:   TIGR00938

Pfam domain/function: PF01636 APH; SSF56112 Kinase_like

EC number: =2.7.1.39

Molecular weight: Translated: 36399; Mature: 36268

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPE
CEEECCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHH
ELPFFLGLMEHLAAHGLACPTPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH
LGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAAEIKSDLAQSIEDELDYLEAH
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
WPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE
CCCCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVK
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RKDPMEYYRKLRFHQGVTGPGQYGIE
CCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPE
EEECCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHH
ELPFFLGLMEHLAAHGLACPTPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH
LGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAAEIKSDLAQSIEDELDYLEAH
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
WPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE
CCCCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVK
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RKDPMEYYRKLRFHQGVTGPGQYGIE
CCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA