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The map label for this gene is ybdL [H]

Identifier: 83309793

GI number: 83309793

Start: 747699

End: 748973

Strand: Reverse

Name: ybdL [H]

Synonym: amb0694

Alternate gene names: 83309793

Gene position: 748973-747699 (Counterclockwise)

Preceding gene: 83309796

Following gene: 83309788

Centisome position: 15.08

GC content: 66.59

Gene sequence:

>1275_bases
ATGCCCTATTTCCAGGCATTTACGCCTATTTCCTGGGCAGCTCACAATCTCTTCACCCGCCGACCGCTTCCGCGATACGC
TGGGGCCTTCCGATTCCGCCCTGGAGCAGACCCGTTGAAGCCCGCCAACGCCATCTTCTCATCCCTCGGCACCACCATCT
TCGAGACCATGTCGCGCCTGGCCCAGGCCCATGGCGCCGTCAATCTCGGTCAAGGCTTCCCCGAGGGGCTGGAGCCCGCC
GACGTAGTCGCCCGGGCGGCCGAGGCCCTGGTCGCCGGCCCCAACCAGTACCCGTCCATGATGGGGACTCCCGACCTGCG
CCAGGCCATCGCCCGGCACGAGCGGCGCTTCTATGGCACGGAATTGGATCCCATGGCCGAGGTGATGGTGACCTCGGGCG
CCACCGAGGCGCTGGCCGACTGCCTGTTCGGCCTGATCGAGCCGGGCGACGAGGTGGTGCTGATCGAACCGCTTTACGAC
AGCTACCTGCCCATCATCCGGCGGGCCGGCGGCATCCCGAAGCTGGTGCGGGTCGAGCCGCCCCATTGGGACCTCCCGCG
CGAGACCCTGGCGGCGGCCTTCTCGCCCAGGACCAAGCTGATGATCCTCAACACCCCGATGAATCCGTCGGGCAAGGTCT
GGAGCCGGGACGAGATGGCGTTCGTCGCCGGGCTGCTGGAGCGCTTCGACGCCTATTGCGTCTGCGACGAGGTCTACGAG
CATCTGGTCTATGACGGACGCCGCCATCTGCCGCTGATGACCCTGCCGGGCATGCGGGAGCGCTGCCTGAAGATCGGCTC
GGCCGGCAAGATCTTCTCGCTGACCGGCTGGAAGGTGGGCTGGGTGGTGGCCGCCCCCGACCTGCTGGCCCCACTGGCCA
AGGTTCACCAGTACCTGACCTTCGCCACGCCGCCCAATCTGCAGTCGGCGGTGGCCTGGGGCTTGGACAAGGAGGATTCC
TATTACGACGGGCTGGCCGCCATGCTGGCCGAGCGGCGCGACCGGCTGGCCGAGGGCTTGCGCGGCGTCGGCTTCGAGGT
GATGGCGGCCGGCGGCAGCTATTTCCTGACCGCCGATTTCCGCCCCCTGGGCTTTGCCGGCGATGACGACGACTTCTGCC
GCCACATCACCGAAAAGGCCGGCGTGGCGGCCATTCCAATCAGCACCTTCTACCAGGGCGGCGACGTCGATCACTTCGCC
CGCTTCTGCTTCGCCAAGACGGAAAGCGCCATTGATGAGGCCGTGATGCGACTTCGTCGTTATTTCAAAGGATAG

Upstream 100 bases:

>100_bases
CGTTGAGAACCCGCGTCAAAACGCGCGACTCATTTAGCACGCATTGTGCCAGTTCGGCCACCCGGAAAAGCGCCAAAACC
CCAGGAATCTCGGGGCAAAG

Downstream 100 bases:

>100_bases
CCCCTTGACGGGCGCCCCCGGATTTGGCTAAACATGCGGCCTCCCCCGGTGGCGGGTGTAGCTCAGTTGGTTAGAGCGCC
AGTTTGTGGTACTGGATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MPYFQAFTPISWAAHNLFTRRPLPRYAGAFRFRPGADPLKPANAIFSSLGTTIFETMSRLAQAHGAVNLGQGFPEGLEPA
DVVARAAEALVAGPNQYPSMMGTPDLRQAIARHERRFYGTELDPMAEVMVTSGATEALADCLFGLIEPGDEVVLIEPLYD
SYLPIIRRAGGIPKLVRVEPPHWDLPRETLAAAFSPRTKLMILNTPMNPSGKVWSRDEMAFVAGLLERFDAYCVCDEVYE
HLVYDGRRHLPLMTLPGMRERCLKIGSAGKIFSLTGWKVGWVVAAPDLLAPLAKVHQYLTFATPPNLQSAVAWGLDKEDS
YYDGLAAMLAERRDRLAEGLRGVGFEVMAAGGSYFLTADFRPLGFAGDDDDFCRHITEKAGVAAIPISTFYQGGDVDHFA
RFCFAKTESAIDEAVMRLRRYFKG

Sequences:

>Translated_424_residues
MPYFQAFTPISWAAHNLFTRRPLPRYAGAFRFRPGADPLKPANAIFSSLGTTIFETMSRLAQAHGAVNLGQGFPEGLEPA
DVVARAAEALVAGPNQYPSMMGTPDLRQAIARHERRFYGTELDPMAEVMVTSGATEALADCLFGLIEPGDEVVLIEPLYD
SYLPIIRRAGGIPKLVRVEPPHWDLPRETLAAAFSPRTKLMILNTPMNPSGKVWSRDEMAFVAGLLERFDAYCVCDEVYE
HLVYDGRRHLPLMTLPGMRERCLKIGSAGKIFSLTGWKVGWVVAAPDLLAPLAKVHQYLTFATPPNLQSAVAWGLDKEDS
YYDGLAAMLAERRDRLAEGLRGVGFEVMAAGGSYFLTADFRPLGFAGDDDDFCRHITEKAGVAAIPISTFYQGGDVDHFA
RFCFAKTESAIDEAVMRLRRYFKG
>Mature_423_residues
PYFQAFTPISWAAHNLFTRRPLPRYAGAFRFRPGADPLKPANAIFSSLGTTIFETMSRLAQAHGAVNLGQGFPEGLEPAD
VVARAAEALVAGPNQYPSMMGTPDLRQAIARHERRFYGTELDPMAEVMVTSGATEALADCLFGLIEPGDEVVLIEPLYDS
YLPIIRRAGGIPKLVRVEPPHWDLPRETLAAAFSPRTKLMILNTPMNPSGKVWSRDEMAFVAGLLERFDAYCVCDEVYEH
LVYDGRRHLPLMTLPGMRERCLKIGSAGKIFSLTGWKVGWVVAAPDLLAPLAKVHQYLTFATPPNLQSAVAWGLDKEDSY
YDGLAAMLAERRDRLAEGLRGVGFEVMAAGGSYFLTADFRPLGFAGDDDDFCRHITEKAGVAAIPISTFYQGGDVDHFAR
FCFAKTESAIDEAVMRLRRYFKG

Specific function: Shows aminotransferase activity with methionine and histidine as substrates, and to a lesser extent also with phenylalanine [H]

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=397, Percent_Identity=38.5390428211587, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI169881279, Length=397, Percent_Identity=38.5390428211587, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI56713254, Length=395, Percent_Identity=35.9493670886076, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI56713256, Length=395, Percent_Identity=35.9493670886076, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI169881281, Length=397, Percent_Identity=34.0050377833753, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI4507369, Length=425, Percent_Identity=21.8823529411765, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1786816, Length=384, Percent_Identity=40.625, Blast_Score=287, Evalue=7e-79,
Organism=Escherichia coli, GI1788722, Length=360, Percent_Identity=26.9444444444444, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1787909, Length=261, Percent_Identity=26.0536398467433, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1787710, Length=261, Percent_Identity=27.2030651340996, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788627, Length=221, Percent_Identity=21.7194570135747, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=403, Percent_Identity=34.4913151364764, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71994476, Length=403, Percent_Identity=34.4913151364764, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17567369, Length=399, Percent_Identity=31.328320802005, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17567663, Length=358, Percent_Identity=20.1117318435754, Blast_Score=72, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6322401, Length=388, Percent_Identity=30.6701030927835, Blast_Score=189, Evalue=6e-49,
Organism=Drosophila melanogaster, GI28573069, Length=401, Percent_Identity=35.6608478802993, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24646114, Length=401, Percent_Identity=35.6608478802993, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI28573067, Length=401, Percent_Identity=35.6608478802993, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI28573065, Length=401, Percent_Identity=35.6608478802993, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI18859735, Length=371, Percent_Identity=26.1455525606469, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 46793; Mature: 46662

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYFQAFTPISWAAHNLFTRRPLPRYAGAFRFRPGADPLKPANAIFSSLGTTIFETMSRL
CCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQAHGAVNLGQGFPEGLEPADVVARAAEALVAGPNQYPSMMGTPDLRQAIARHERRFYGT
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
ELDPMAEVMVTSGATEALADCLFGLIEPGDEVVLIEPLYDSYLPIIRRAGGIPKLVRVEP
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEECC
PHWDLPRETLAAAFSPRTKLMILNTPMNPSGKVWSRDEMAFVAGLLERFDAYCVCDEVYE
CCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLVYDGRRHLPLMTLPGMRERCLKIGSAGKIFSLTGWKVGWVVAAPDLLAPLAKVHQYLT
HHHHCCCCCCCEECCCCHHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHH
FATPPNLQSAVAWGLDKEDSYYDGLAAMLAERRDRLAEGLRGVGFEVMAAGGSYFLTADF
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECC
RPLGFAGDDDDFCRHITEKAGVAAIPISTFYQGGDVDHFARFCFAKTESAIDEAVMRLRR
CCCCCCCCCHHHHHHHHHHCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YFKG
HHCC
>Mature Secondary Structure 
PYFQAFTPISWAAHNLFTRRPLPRYAGAFRFRPGADPLKPANAIFSSLGTTIFETMSRL
CCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQAHGAVNLGQGFPEGLEPADVVARAAEALVAGPNQYPSMMGTPDLRQAIARHERRFYGT
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
ELDPMAEVMVTSGATEALADCLFGLIEPGDEVVLIEPLYDSYLPIIRRAGGIPKLVRVEP
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEECC
PHWDLPRETLAAAFSPRTKLMILNTPMNPSGKVWSRDEMAFVAGLLERFDAYCVCDEVYE
CCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLVYDGRRHLPLMTLPGMRERCLKIGSAGKIFSLTGWKVGWVVAAPDLLAPLAKVHQYLT
HHHHCCCCCCCEECCCCHHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHH
FATPPNLQSAVAWGLDKEDSYYDGLAAMLAERRDRLAEGLRGVGFEVMAAGGSYFLTADF
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECC
RPLGFAGDDDDFCRHITEKAGVAAIPISTFYQGGDVDHFARFCFAKTESAIDEAVMRLRR
CCCCCCCCCHHHHHHHHHHCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YFKG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]