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The map label for this gene is 83309777

Identifier: 83309777

GI number: 83309777

Start: 729218

End: 730156

Strand: Reverse

Name: 83309777

Synonym: amb0678

Alternate gene names: NA

Gene position: 730156-729218 (Counterclockwise)

Preceding gene: 83309778

Following gene: 83309776

Centisome position: 14.7

GC content: 71.57

Gene sequence:

>939_bases
ATGATCCAGGTTCTCTCGGCCCTGGCGCCGATCATCGCGCTGATCATTCTGGGGCATCAGATGCGGTCGAGGGGCTGGGT
CGACGATGCCTTCTGGGCGCCGGCGGAATGGGCCACCTTTCACCTGTTCCTCCCCGCCTTGCTGGTCGCCTCGCTGGCCC
GCGCCCGCCTGGAGGGGCTGCCGGTGGGCACCATCTTCGCCGTCGAGGCGGGGCTGGTGGTGGTGATGGCCGCGACGGCC
GGTCTGGCGGCGCGGCGGCTGGAACAGCCGCCGTGGTCCCTGGATGGCCCCGCCTTCACCTCCTTGTTCCAATGCGTGAT
CCGCCCCAACACCTATGTGGCCCTGGCGGTAGGAGCCGGGCTGTGGGGCAGCCAGGGCGTGGCGCTGATCGCCGTCTGCA
CCGCCGCCGTGATCCCCCTGGTCAATCTGCTGTCCACCCTGGCCATGCTGCATTGGGCGCGGACGGACGGGAGGCTGGGC
TGGCGCGAGGCGGTGTTGCCGGTGATCACCAACCCGCTGATCCTGTCCTGCGCCGTGGGCGCCGCCATCAACCTCTCGGG
CCTGCGCCTGCCCCCGGTGGCCGCCTCCATCCTCGACATCCTGGGCGGCGCCTCGCTGCCTTTGGCACTGCTGGCCATCG
GCGCCGGCATCCGCCTGGAGAGCCTGCGGCAACCCGCCCCGTCGGTGTGGCTGGCCATCGCGGCCAAGATGGTCGTCCTG
CCCCTGCTGGCCTATGGCGCGCTGAAAGCCGCCGGGCTGGGTGGCGCCATCCTGGGGGCCTGCGGCATCTACGCCGCCCT
GCCCGCCTCGCCCGCCTCCTACGTCACCGCCCGCCGGATGGGCGGCGACGCCGCCCTGGTGGCCACCATGCTGTCGGCCC
AGACCATCGCCGGAGCGGTGATTCTGCCTTTGTGGCTGATGGTGCTGGGAGCCGGTTGA

Upstream 100 bases:

>100_bases
CGGGGCTGAACACCCTGATCCAGTCGCTGCTGGCCACCATCCGCGAACTGGGCGACGACCTGGCCGACGCCAGGTCCAGT
TTGGCGGATCACGGGGTGGA

Downstream 100 bases:

>100_bases
ATCCCCTTGCGGCCGAATTAAAAAAACGTATGCTCGTTTAACGCACCAACCGGGCTGTATGAGGGAACGAGCATGACCGG
CTTCAATTCCGCGCTGAACT

Product: permease

Products: NA

Alternate protein names: Permease; Transporter AEC Family; Efflux Protein; Auxin Efflux Carrier Protein; Permease Transmembrane Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIQVLSALAPIIALIILGHQMRSRGWVDDAFWAPAEWATFHLFLPALLVASLARARLEGLPVGTIFAVEAGLVVVMAATA
GLAARRLEQPPWSLDGPAFTSLFQCVIRPNTYVALAVGAGLWGSQGVALIAVCTAAVIPLVNLLSTLAMLHWARTDGRLG
WREAVLPVITNPLILSCAVGAAINLSGLRLPPVAASILDILGGASLPLALLAIGAGIRLESLRQPAPSVWLAIAAKMVVL
PLLAYGALKAAGLGGAILGACGIYAALPASPASYVTARRMGGDAALVATMLSAQTIAGAVILPLWLMVLGAG

Sequences:

>Translated_312_residues
MIQVLSALAPIIALIILGHQMRSRGWVDDAFWAPAEWATFHLFLPALLVASLARARLEGLPVGTIFAVEAGLVVVMAATA
GLAARRLEQPPWSLDGPAFTSLFQCVIRPNTYVALAVGAGLWGSQGVALIAVCTAAVIPLVNLLSTLAMLHWARTDGRLG
WREAVLPVITNPLILSCAVGAAINLSGLRLPPVAASILDILGGASLPLALLAIGAGIRLESLRQPAPSVWLAIAAKMVVL
PLLAYGALKAAGLGGAILGACGIYAALPASPASYVTARRMGGDAALVATMLSAQTIAGAVILPLWLMVLGAG
>Mature_312_residues
MIQVLSALAPIIALIILGHQMRSRGWVDDAFWAPAEWATFHLFLPALLVASLARARLEGLPVGTIFAVEAGLVVVMAATA
GLAARRLEQPPWSLDGPAFTSLFQCVIRPNTYVALAVGAGLWGSQGVALIAVCTAAVIPLVNLLSTLAMLHWARTDGRLG
WREAVLPVITNPLILSCAVGAAINLSGLRLPPVAASILDILGGASLPLALLAIGAGIRLESLRQPAPSVWLAIAAKMVVL
PLLAYGALKAAGLGGAILGACGIYAALPASPASYVTARRMGGDAALVATMLSAQTIAGAVILPLWLMVLGAG

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31998; Mature: 31998

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVLSALAPIIALIILGHQMRSRGWVDDAFWAPAEWATFHLFLPALLVASLARARLEGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PVGTIFAVEAGLVVVMAATAGLAARRLEQPPWSLDGPAFTSLFQCVIRPNTYVALAVGAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
LWGSQGVALIAVCTAAVIPLVNLLSTLAMLHWARTDGRLGWREAVLPVITNPLILSCAVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHC
AAINLSGLRLPPVAASILDILGGASLPLALLAIGAGIRLESLRQPAPSVWLAIAAKMVVL
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHH
PLLAYGALKAAGLGGAILGACGIYAALPASPASYVTARRMGGDAALVATMLSAQTIAGAV
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ILPLWLMVLGAG
HHHHHHHHHCCC
>Mature Secondary Structure
MIQVLSALAPIIALIILGHQMRSRGWVDDAFWAPAEWATFHLFLPALLVASLARARLEGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PVGTIFAVEAGLVVVMAATAGLAARRLEQPPWSLDGPAFTSLFQCVIRPNTYVALAVGAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
LWGSQGVALIAVCTAAVIPLVNLLSTLAMLHWARTDGRLGWREAVLPVITNPLILSCAVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHC
AAINLSGLRLPPVAASILDILGGASLPLALLAIGAGIRLESLRQPAPSVWLAIAAKMVVL
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHH
PLLAYGALKAAGLGGAILGACGIYAALPASPASYVTARRMGGDAALVATMLSAQTIAGAV
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ILPLWLMVLGAG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA