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The map label for this gene is rpfG [H]

Identifier: 83309751

GI number: 83309751

Start: 703170

End: 704333

Strand: Reverse

Name: rpfG [H]

Synonym: amb0652

Alternate gene names: 83309751

Gene position: 704333-703170 (Counterclockwise)

Preceding gene: 83309752

Following gene: 83309750

Centisome position: 14.18

GC content: 60.4

Gene sequence:

>1164_bases
TTGACGTATGCCTTCTTGCGGAGGGCCGGCATGGGCGCGATCGGACGTGACGCGTCGGCGGCAGCCCCCCGGGTTTTGGT
CGCCGTCATTGATGGCATGGCGGAGCATCGCCTTCAGGTCGGCCAGGCACTGACGTCCTTTTACCGCGTCGCCTGTTTCG
AGGATCTGCGAGAGGCCGTGCCGCACCTGCGCCGCGAGCCGCCCCTGGCCCTGGTGGTGGACGAGAGCGCGAAACCCTTT
GGTGGACGGGAGACCATTAGACGACTTCGCAACATGCCGTCGCTGAAAGAGGTCCGCATCATTGCCACCTCGGGAAAGGT
GGACAGCAAGCTCTTTTCCACGGCCGAGGAATTGGGGTGCGACGCAATCCTATCAAAGCCCTTCCGCCGGAGCGAACTGA
TCTCCACGATCTCCTCTCTGGTCAACCACTCGATAGAGGCCGGGTGGAAGAGATTGGGGCTTTATCATCGCCACGCCCTG
ACCTCGGCATTGCAAACGTTCAACGGCATCTCGGATTTGATCGATCGCGGCGAAGCTGTGGAATACGTGGCCGTCCGAGA
GGCATGTTCGCCGCTCGTCGATGCGGTGCAGCGAAACGACTTCAAGGCGATCCTGAACGGTGTCCGCGGCCACGACAATT
ACTCGTATGTGCACTCCATGCGCGTTGCGACGTTCCTGTCGCTATTCGGCCATGCAATGGGGCTGAAGGGAGAGGACCTT
CTGCTGCTTTCAAGCGGGGGCCTGCTGCATGACATCGGCAAAATGTCCATTCCGCACGAAGTCCTGAACAAGCCGGGCCG
TCTCACTGATGACGAATTCGCGGTTATGCGCGGACATGTGGACAGTTCGGCCGCTTATATCACCCAGTGCCCGACCATGC
CCAAGGGCGTCGGCCTGATTGCTGCGCAGCATCATGAGAAGCTGGATGGGAGCGGCTATCCCAACGGCTTGAAGGGCAAG
GAACTCAATGAACTTGCCCGCATGGCCGCGATCGTCGACGTGTTCAGCGCCCTGACCGACCGACGTTGCTACAAGCCGCC
GATGGAGCCGGAGAATGCCCTGAAGATCATGCACGATGAGATGGGCAGCCATCTCGACACGCAAATGCTGCGCCTTTTCA
TCGACCTTTTGCTGTCGTCGGCAGAAGAGAGTGCGGCAGGCTGA

Upstream 100 bases:

>100_bases
TTGCAGCTTGCTTAAAAGCGCCAACAGACATGAGATCCTGTGCCGTCTTGCCTTTGCCGATAGCGGTCTTCAATGATTGC
CGGGGCGGAGCGGCAATCTG

Downstream 100 bases:

>100_bases
GCCGCGGGGGGAGACGTCATGAGACAGCCTCGTTGGGAACAGCGGCAGGCCGTTCGTTACCCAGGGCAAACCCTGGTGCT
GAAAGTCAATGGATGTATCC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTYAFLRRAGMGAIGRDASAAAPRVLVAVIDGMAEHRLQVGQALTSFYRVACFEDLREAVPHLRREPPLALVVDESAKPF
GGRETIRRLRNMPSLKEVRIIATSGKVDSKLFSTAEELGCDAILSKPFRRSELISTISSLVNHSIEAGWKRLGLYHRHAL
TSALQTFNGISDLIDRGEAVEYVAVREACSPLVDAVQRNDFKAILNGVRGHDNYSYVHSMRVATFLSLFGHAMGLKGEDL
LLLSSGGLLHDIGKMSIPHEVLNKPGRLTDDEFAVMRGHVDSSAAYITQCPTMPKGVGLIAAQHHEKLDGSGYPNGLKGK
ELNELARMAAIVDVFSALTDRRCYKPPMEPENALKIMHDEMGSHLDTQMLRLFIDLLLSSAEESAAG

Sequences:

>Translated_387_residues
MTYAFLRRAGMGAIGRDASAAAPRVLVAVIDGMAEHRLQVGQALTSFYRVACFEDLREAVPHLRREPPLALVVDESAKPF
GGRETIRRLRNMPSLKEVRIIATSGKVDSKLFSTAEELGCDAILSKPFRRSELISTISSLVNHSIEAGWKRLGLYHRHAL
TSALQTFNGISDLIDRGEAVEYVAVREACSPLVDAVQRNDFKAILNGVRGHDNYSYVHSMRVATFLSLFGHAMGLKGEDL
LLLSSGGLLHDIGKMSIPHEVLNKPGRLTDDEFAVMRGHVDSSAAYITQCPTMPKGVGLIAAQHHEKLDGSGYPNGLKGK
ELNELARMAAIVDVFSALTDRRCYKPPMEPENALKIMHDEMGSHLDTQMLRLFIDLLLSSAEESAAG
>Mature_386_residues
TYAFLRRAGMGAIGRDASAAAPRVLVAVIDGMAEHRLQVGQALTSFYRVACFEDLREAVPHLRREPPLALVVDESAKPFG
GRETIRRLRNMPSLKEVRIIATSGKVDSKLFSTAEELGCDAILSKPFRRSELISTISSLVNHSIEAGWKRLGLYHRHALT
SALQTFNGISDLIDRGEAVEYVAVREACSPLVDAVQRNDFKAILNGVRGHDNYSYVHSMRVATFLSLFGHAMGLKGEDLL
LLSSGGLLHDIGKMSIPHEVLNKPGRLTDDEFAVMRGHVDSSAAYITQCPTMPKGVGLIAAQHHEKLDGSGYPNGLKGKE
LNELARMAAIVDVFSALTDRRCYKPPMEPENALKIMHDEMGSHLDTQMLRLFIDLLLSSAEESAAG

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 42401; Mature: 42270

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYAFLRRAGMGAIGRDASAAAPRVLVAVIDGMAEHRLQVGQALTSFYRVACFEDLREAV
CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PHLRREPPLALVVDESAKPFGGRETIRRLRNMPSLKEVRIIATSGKVDSKLFSTAEELGC
HHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHEEEEEECCCHHHHHHHHHHHHCH
DAILSKPFRRSELISTISSLVNHSIEAGWKRLGLYHRHALTSALQTFNGISDLIDRGEAV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EYVAVREACSPLVDAVQRNDFKAILNGVRGHDNYSYVHSMRVATFLSLFGHAMGLKGEDL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
LLLSSGGLLHDIGKMSIPHEVLNKPGRLTDDEFAVMRGHVDSSAAYITQCPTMPKGVGLI
EEEECCCHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHH
AAQHHEKLDGSGYPNGLKGKELNELARMAAIVDVFSALTDRRCYKPPMEPENALKIMHDE
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MGSHLDTQMLRLFIDLLLSSAEESAAG
HCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TYAFLRRAGMGAIGRDASAAAPRVLVAVIDGMAEHRLQVGQALTSFYRVACFEDLREAV
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PHLRREPPLALVVDESAKPFGGRETIRRLRNMPSLKEVRIIATSGKVDSKLFSTAEELGC
HHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHEEEEEECCCHHHHHHHHHHHHCH
DAILSKPFRRSELISTISSLVNHSIEAGWKRLGLYHRHALTSALQTFNGISDLIDRGEAV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EYVAVREACSPLVDAVQRNDFKAILNGVRGHDNYSYVHSMRVATFLSLFGHAMGLKGEDL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
LLLSSGGLLHDIGKMSIPHEVLNKPGRLTDDEFAVMRGHVDSSAAYITQCPTMPKGVGLI
EEEECCCHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHH
AAQHHEKLDGSGYPNGLKGKELNELARMAAIVDVFSALTDRRCYKPPMEPENALKIMHDE
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MGSHLDTQMLRLFIDLLLSSAEESAAG
HCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]