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The map label for this gene is torR [H]

Identifier: 83309750

GI number: 83309750

Start: 701923

End: 702675

Strand: Reverse

Name: torR [H]

Synonym: amb0651

Alternate gene names: 83309750

Gene position: 702675-701923 (Counterclockwise)

Preceding gene: 83309751

Following gene: 83309748

Centisome position: 14.15

GC content: 60.69

Gene sequence:

>753_bases
ATGGGCACGGATGACGGTTGCGCGCCGACCGGGTCGGCGAGGGGGGACGCGCGTCCAAGTCTGATCGTGTTGGAAGATGA
CCCCGTCACACGGTCGATGATCGGTCGGTATTTCTCCAACGAGGGCTTTGAGGTCCGCGAAGCGGCTTCGGCGGCGGAAT
GCCGGGTGCTGCTTAAGGATCGTGACGTCGACCTTCTTTTCGTCGATATCAACCTCCCCGATGCCAATGGCATCAGCTTC
TCGCAGGAAATTCGTGCGAAAAGCCCCGTCGGCATCATCTTCGTAACGCAGCTGGACAGTGAACTGGACCGCGTCGTCGG
ATTGGAAGTCGCGGGAGATGACTACGTAACAAAGCCAATCAATCTGCGCGAATTGATGGCCCGCTCGCGGGCGCTGTTGC
GGCGGCGCAAGCTTGATCGCGAGCAAGTCGAGCGCCGCAACGTGGTCGCCTTCGGAGCATATATCCTGGATCTTACCCGG
CGGGAATTGTCCAAATCCGGCCAGCAGATCGTCTTGACCCGCGGCGAGTTCGACCTGCTGGCGGCGCTTGTTGAAGCGGA
AGGACGCCCACTTTATCGGGATTACCTGGCCGAAGTGGTCAGCAGCCGGAGTGGCGAGGGGGATGCGCGAACCGTGGATT
CCCTGGTTTCGCGCCTGCGACGCAAACTGGCTCATCCCGATGGCGGCAGCGCATTGATCGTGACCGTCACCGGCATCGGC
TATCGTTTTGGGGCAGTGATTGATCCTAGGTGA

Upstream 100 bases:

>100_bases
GATCGAGGTGCAGTATCCGTTATTTTTTTGCCCCCATCTGCTTGTACTGCCCCAGCGCCAGGATTATGATGACGAGGGAA
ATGGGCATGGGACATGAGGA

Downstream 100 bases:

>100_bases
TCTGCCGGGCCAGTTTGGCCCACCCTTTCAGGCTTGCCCGTCGGGATTGGCGCAAAAGGGCTACCTTCGCCCGGAGCTGC
TCCTGCGTCTCAACGCCGGC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MGTDDGCAPTGSARGDARPSLIVLEDDPVTRSMIGRYFSNEGFEVREAASAAECRVLLKDRDVDLLFVDINLPDANGISF
SQEIRAKSPVGIIFVTQLDSELDRVVGLEVAGDDYVTKPINLRELMARSRALLRRRKLDREQVERRNVVAFGAYILDLTR
RELSKSGQQIVLTRGEFDLLAALVEAEGRPLYRDYLAEVVSSRSGEGDARTVDSLVSRLRRKLAHPDGGSALIVTVTGIG
YRFGAVIDPR

Sequences:

>Translated_250_residues
MGTDDGCAPTGSARGDARPSLIVLEDDPVTRSMIGRYFSNEGFEVREAASAAECRVLLKDRDVDLLFVDINLPDANGISF
SQEIRAKSPVGIIFVTQLDSELDRVVGLEVAGDDYVTKPINLRELMARSRALLRRRKLDREQVERRNVVAFGAYILDLTR
RELSKSGQQIVLTRGEFDLLAALVEAEGRPLYRDYLAEVVSSRSGEGDARTVDSLVSRLRRKLAHPDGGSALIVTVTGIG
YRFGAVIDPR
>Mature_249_residues
GTDDGCAPTGSARGDARPSLIVLEDDPVTRSMIGRYFSNEGFEVREAASAAECRVLLKDRDVDLLFVDINLPDANGISFS
QEIRAKSPVGIIFVTQLDSELDRVVGLEVAGDDYVTKPINLRELMARSRALLRRRKLDREQVERRNVVAFGAYILDLTRR
ELSKSGQQIVLTRGEFDLLAALVEAEGRPLYRDYLAEVVSSRSGEGDARTVDSLVSRLRRKLAHPDGGSALIVTVTGIGY
RFGAVIDPR

Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Phosphorylated torR activates the transcription of the torCAD operon by binding to four decameric boxes located in the torCAD p

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=41.9213973799127, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=38.7665198237885, Blast_Score=154, Evalue=4e-39,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=36.6812227074236, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=31.7180616740088, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=31.6964285714286, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI2367329, Length=225, Percent_Identity=35.5555555555556, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=34.9775784753363, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=31.2775330396476, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=29.4642857142857, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=31.140350877193, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=30.5309734513274, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=30.6666666666667, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=32.15859030837, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=26.2931034482759, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27538; Mature: 27406

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTDDGCAPTGSARGDARPSLIVLEDDPVTRSMIGRYFSNEGFEVREAASAAECRVLLKD
CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHEEEEEEC
RDVDLLFVDINLPDANGISFSQEIRAKSPVGIIFVTQLDSELDRVVGLEVAGDDYVTKPI
CCCEEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEECCHHHHHHEEEEECCCCCEECCC
NLRELMARSRALLRRRKLDREQVERRNVVAFGAYILDLTRRELSKSGQQIVLTRGEFDLL
CHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
AALVEAEGRPLYRDYLAEVVSSRSGEGDARTVDSLVSRLRRKLAHPDGGSALIVTVTGIG
HHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
YRFGAVIDPR
EEECEEECCC
>Mature Secondary Structure 
GTDDGCAPTGSARGDARPSLIVLEDDPVTRSMIGRYFSNEGFEVREAASAAECRVLLKD
CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHEEEEEEC
RDVDLLFVDINLPDANGISFSQEIRAKSPVGIIFVTQLDSELDRVVGLEVAGDDYVTKPI
CCCEEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEECCHHHHHHEEEEECCCCCEECCC
NLRELMARSRALLRRRKLDREQVERRNVVAFGAYILDLTRRELSKSGQQIVLTRGEFDLL
CHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
AALVEAEGRPLYRDYLAEVVSSRSGEGDARTVDSLVSRLRRKLAHPDGGSALIVTVTGIG
HHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
YRFGAVIDPR
EEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]