Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is pssA [H]

Identifier: 83309702

GI number: 83309702

Start: 650279

End: 651073

Strand: Reverse

Name: pssA [H]

Synonym: amb0603

Alternate gene names: 83309702

Gene position: 651073-650279 (Counterclockwise)

Preceding gene: 83309703

Following gene: 83309701

Centisome position: 13.11

GC content: 66.04

Gene sequence:

>795_bases
ATGTTCCGCCCCAAGCGTCCGCCCCGCATCCGGGGGTTGTCGATCAACAAGCTGATCCCCAACATTCTGACGCTGCTGGC
GCTGTGCGCCGGGTTGACCGCCATCCGCTTCGCCGTCCACGGCATGTGGAAGGAGGCGGTGATGTCCACCGTGCTGGCCG
CCATCCTGGACGGGCTGGACGGACGGGTCGCCCGCCTGTTGCAGGGCACGTCGAAGTTCGGCGCCGAGCTGGACTCGCTC
TCCGATTTCGTCAGCTTCGGCGTGGCGCCGGCCATGGTGCTGTATTTCTGGACCATGCAGGGCGCCGGAGCCTATGGCTG
GGCCATGGTGCTGCTGTTCTCGGTATGCTGCGCCCTGCGCCTCGCCCGATTCAACACCATGATCGGCGAGCCCGACCTGC
CGCCCTACGCCTATAATTTCTTCACCGGCGTCCCAGCCCCGGCGGCGGCGGGGCTGGTGCTGATGCCGCTGGTCTTCACC
ATCCAGTTCGGCGGCGGCTTCTTCGACCAGCCGATGGTGGTGTCGGTGTTCCTGATGGGCGTCTCGTTCCTGATGGTCAG
CAAGATCCCGACCTTCTCGGGTAAGAAGGTGCGCATTCCCCATCGCTGGGTGCTGCCTATCCTGCTGATCATCGGCCTGG
CCGCCGCCTTCCTGGTCACCGAGCCATGGTTGACCCTGTCCCTGCTGGGGACCTTGTATCTGGGCATGATTCCCGTCAGC
CTGCGCTCGTTCCGCCGCCTGAAGGCCCAAGCCGAGTCCGCCCCTCCCGCCGAACCGGAAGCCCCCACCGCGTAA

Upstream 100 bases:

>100_bases
TGGCGCCCCTGGTCAGCCTGGGACAAAGCATCATCGCCGGCGAGACGGTTCTGGCCGACCTGGATTCCACGGAAGGCGCC
CGCCAGGGAGAAATCCGCTG

Downstream 100 bases:

>100_bases
CACTGTTGCTTTTCGGCAACAGCCGCCGGAGAACATGCTGCGGCGCGGCACCGTTACCTTGCCGGATGCCGGGGGCGAGC
GTAGATATGGGGGCAGATTC

Product: phosphatidylserine synthase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLDGRVARLLQGTSKFGAELDSL
SDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALRLARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFT
IQFGGGFFDQPMVVSVFLMGVSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS
LRSFRRLKAQAESAPPAEPEAPTA

Sequences:

>Translated_264_residues
MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLDGRVARLLQGTSKFGAELDSL
SDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALRLARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFT
IQFGGGFFDQPMVVSVFLMGVSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS
LRSFRRLKAQAESAPPAEPEAPTA
>Mature_264_residues
MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLDGRVARLLQGTSKFGAELDSL
SDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALRLARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFT
IQFGGGFFDQPMVVSVFLMGVSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS
LRSFRRLKAQAESAPPAEPEAPTA

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=199, Percent_Identity=35.1758793969849, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 28637; Mature: 28637

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GRVARLLQGTSKFGAELDSLSDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFTIQFGGGFFDQPMVVSVFLMG
HHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS
HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LRSFRRLKAQAESAPPAEPEAPTA
HHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GRVARLLQGTSKFGAELDSLSDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFTIQFGGGFFDQPMVVSVFLMG
HHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS
HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LRSFRRLKAQAESAPPAEPEAPTA
HHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]