| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is pssA [H]
Identifier: 83309702
GI number: 83309702
Start: 650279
End: 651073
Strand: Reverse
Name: pssA [H]
Synonym: amb0603
Alternate gene names: 83309702
Gene position: 651073-650279 (Counterclockwise)
Preceding gene: 83309703
Following gene: 83309701
Centisome position: 13.11
GC content: 66.04
Gene sequence:
>795_bases ATGTTCCGCCCCAAGCGTCCGCCCCGCATCCGGGGGTTGTCGATCAACAAGCTGATCCCCAACATTCTGACGCTGCTGGC GCTGTGCGCCGGGTTGACCGCCATCCGCTTCGCCGTCCACGGCATGTGGAAGGAGGCGGTGATGTCCACCGTGCTGGCCG CCATCCTGGACGGGCTGGACGGACGGGTCGCCCGCCTGTTGCAGGGCACGTCGAAGTTCGGCGCCGAGCTGGACTCGCTC TCCGATTTCGTCAGCTTCGGCGTGGCGCCGGCCATGGTGCTGTATTTCTGGACCATGCAGGGCGCCGGAGCCTATGGCTG GGCCATGGTGCTGCTGTTCTCGGTATGCTGCGCCCTGCGCCTCGCCCGATTCAACACCATGATCGGCGAGCCCGACCTGC CGCCCTACGCCTATAATTTCTTCACCGGCGTCCCAGCCCCGGCGGCGGCGGGGCTGGTGCTGATGCCGCTGGTCTTCACC ATCCAGTTCGGCGGCGGCTTCTTCGACCAGCCGATGGTGGTGTCGGTGTTCCTGATGGGCGTCTCGTTCCTGATGGTCAG CAAGATCCCGACCTTCTCGGGTAAGAAGGTGCGCATTCCCCATCGCTGGGTGCTGCCTATCCTGCTGATCATCGGCCTGG CCGCCGCCTTCCTGGTCACCGAGCCATGGTTGACCCTGTCCCTGCTGGGGACCTTGTATCTGGGCATGATTCCCGTCAGC CTGCGCTCGTTCCGCCGCCTGAAGGCCCAAGCCGAGTCCGCCCCTCCCGCCGAACCGGAAGCCCCCACCGCGTAA
Upstream 100 bases:
>100_bases TGGCGCCCCTGGTCAGCCTGGGACAAAGCATCATCGCCGGCGAGACGGTTCTGGCCGACCTGGATTCCACGGAAGGCGCC CGCCAGGGAGAAATCCGCTG
Downstream 100 bases:
>100_bases CACTGTTGCTTTTCGGCAACAGCCGCCGGAGAACATGCTGCGGCGCGGCACCGTTACCTTGCCGGATGCCGGGGGCGAGC GTAGATATGGGGGCAGATTC
Product: phosphatidylserine synthase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLDGRVARLLQGTSKFGAELDSL SDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALRLARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFT IQFGGGFFDQPMVVSVFLMGVSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS LRSFRRLKAQAESAPPAEPEAPTA
Sequences:
>Translated_264_residues MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLDGRVARLLQGTSKFGAELDSL SDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALRLARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFT IQFGGGFFDQPMVVSVFLMGVSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS LRSFRRLKAQAESAPPAEPEAPTA >Mature_264_residues MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLDGRVARLLQGTSKFGAELDSL SDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALRLARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFT IQFGGGFFDQPMVVSVFLMGVSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS LRSFRRLKAQAESAPPAEPEAPTA
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=199, Percent_Identity=35.1758793969849, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 28637; Mature: 28637
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRVARLLQGTSKFGAELDSLSDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFTIQFGGGFFDQPMVVSVFLMG HHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRSFRRLKAQAESAPPAEPEAPTA HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MFRPKRPPRIRGLSINKLIPNILTLLALCAGLTAIRFAVHGMWKEAVMSTVLAAILDGLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRVARLLQGTSKFGAELDSLSDFVSFGVAPAMVLYFWTMQGAGAYGWAMVLLFSVCCALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LARFNTMIGEPDLPPYAYNFFTGVPAPAAAGLVLMPLVFTIQFGGGFFDQPMVVSVFLMG HHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VSFLMVSKIPTFSGKKVRIPHRWVLPILLIIGLAAAFLVTEPWLTLSLLGTLYLGMIPVS HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRSFRRLKAQAESAPPAEPEAPTA HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]