Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83309700

Identifier: 83309700

GI number: 83309700

Start: 648479

End: 648991

Strand: Reverse

Name: 83309700

Synonym: amb0601

Alternate gene names: NA

Gene position: 648991-648479 (Counterclockwise)

Preceding gene: 83309701

Following gene: 83309696

Centisome position: 13.07

GC content: 65.89

Gene sequence:

>513_bases
ATGCTCGTCCGTCTTGCCGTCATCGCCGCCGCCCTGCTCGCCTCGACCGGCACGGCTTTCGCCGCCGATGCCAAGCGCCT
GGGAAGATACGGCGAGTGGGAGAGCCTGACCTACACCGAGGGCAACGCCAAGGTCTGCTACATCGCCACCACCGCCGCCA
AGGTCACCGGCGGCGAGAAAGGCAAGAACTCCACCTTCCTCATCGTCACCCATCGCCCCGGCTCCAAGAGCAACGACGAG
GTCAGCATCAACGCCACCTACACCTTCAAGAAGGATTCGTCGGTGGAGCTGCAGGTGGGCGCCCTGAAGCATTCGCTGTT
CACCAAGGGCGAGCGTGCCTGGGCCGCCGATCCCAAGACCGATAAGGCCATCATCGCCACCCTGCAGCGGGGCAAGGAAG
CCATTCTGCACGCCAGCCCCGCCAAGGGCAGCGACGTGGCGGCCACCTTCCCGCTGTCGGGCTTCTCCGACGCCCTGGCC
TCGGCCGACAAGGCGTGCAACATCAAGCGCTGA

Upstream 100 bases:

>100_bases
AAATCGGCAAGGGCTCGACCTCGCGGTCGGGCCCTTTTCGATTCACAAGCCCGGCGATGCCGGGTAATAAGAGTCCAGTG
GTCACCAAGGAATTGCGCCC

Downstream 100 bases:

>100_bases
GCCCAGCCCCCCATTTATCTGCAATCAAAAGAGAGGTCTGGAGGCATCGCCTCCAGGCGGGTTTGGGCGGCAGCCCAATG
CCCCTCGCCCCCGCCACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLVRLAVIAAALLASTGTAFAADAKRLGRYGEWESLTYTEGNAKVCYIATTAAKVTGGEKGKNSTFLIVTHRPGSKSNDE
VSINATYTFKKDSSVELQVGALKHSLFTKGERAWAADPKTDKAIIATLQRGKEAILHASPAKGSDVAATFPLSGFSDALA
SADKACNIKR

Sequences:

>Translated_170_residues
MLVRLAVIAAALLASTGTAFAADAKRLGRYGEWESLTYTEGNAKVCYIATTAAKVTGGEKGKNSTFLIVTHRPGSKSNDE
VSINATYTFKKDSSVELQVGALKHSLFTKGERAWAADPKTDKAIIATLQRGKEAILHASPAKGSDVAATFPLSGFSDALA
SADKACNIKR
>Mature_170_residues
MLVRLAVIAAALLASTGTAFAADAKRLGRYGEWESLTYTEGNAKVCYIATTAAKVTGGEKGKNSTFLIVTHRPGSKSNDE
VSINATYTFKKDSSVELQVGALKHSLFTKGERAWAADPKTDKAIIATLQRGKEAILHASPAKGSDVAATFPLSGFSDALA
SADKACNIKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17908; Mature: 17908

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRLAVIAAALLASTGTAFAADAKRLGRYGEWESLTYTEGNAKVCYIATTAAKVTGGEK
CEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCC
GKNSTFLIVTHRPGSKSNDEVSINATYTFKKDSSVELQVGALKHSLFTKGERAWAADPKT
CCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCC
DKAIIATLQRGKEAILHASPAKGSDVAATFPLSGFSDALASADKACNIKR
CHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLVRLAVIAAALLASTGTAFAADAKRLGRYGEWESLTYTEGNAKVCYIATTAAKVTGGEK
CEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCC
GKNSTFLIVTHRPGSKSNDEVSINATYTFKKDSSVELQVGALKHSLFTKGERAWAADPKT
CCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCC
DKAIIATLQRGKEAILHASPAKGSDVAATFPLSGFSDALASADKACNIKR
CHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA