| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309693
Identifier: 83309693
GI number: 83309693
Start: 640849
End: 641922
Strand: Reverse
Name: 83309693
Synonym: amb0594
Alternate gene names: NA
Gene position: 641922-640849 (Counterclockwise)
Preceding gene: 83309694
Following gene: 83309692
Centisome position: 12.92
GC content: 71.23
Gene sequence:
>1074_bases ATGACCCTGGCCGACATCCTCGCCGACCGCATCCGCGCCACCGGTCCCATTCCGGTGTCCGAGTTCATGGCCGAGGCCTT GGGCCATCCGGAATACGGCTATTACATGGGCCGCGACCCGTTCGGCATGGCGGGCGACTTCATCACGGCGCCGGAAATCA GCCAGATGTTCGGCGAGCTGATCGGCCTGTGGTGCGCCCTGGTCTGGCAGAGCATGGGCGCACCCAAACGGGTGGTGCTG GCCGAGATCGGGCCGGGACGCGGCACCCTGATGGCCGATCTGCTGCGTGCCGCGCAGGCCCTGCCTCCCTTCGCCCTGGC CCTGAACGTCCACCTGATCGAGACCAGCCCATCCTTGCGCAATCGTCAGGCCCAGGCCCTGACCGACCGTTCGGTCGAGT GGCACGAGCGGTTCGAGGATCTGCCCGACGGCCCGCTGCTGCTGGTGGCCAACGAGCTGTTCGACGCCCTGCCCATTCGC CAGTTGGAAAAGGCCGGAGGCGTCTGGCGTGAACGGGTGGTGGCGCTGGACGAGGCCGGCGCCTTCGCCTTCGCCCAGGG CCCTGTCGTGGCCGAGCCGCCCCTGGCCCCCGCCGTGCTGGGCGCGGCCGACGGCGCCGTGGCGGAACTCTGTCCCCAGG GCCGCGCCCTGGCCGGGACCATCGCCCGGCGGCTGGCCCATCAGGGCGGAGCCGCTCTGATCATCGATTACGGCTATGGC AAGAGCGCCGCCGGCGACTCGCTCCAGGCGCTGAAGAGCCACAAGCGCCACCCGGTGCTGTCCGGGCCGGGGACCGCCGA CATCACCGCCCATGTGGACTTCCAGGCCCTGGCCGAGGCGGCCTCCGGGCTGGCCCGCGCCCATGGGCCGGTGCCCCAGG GCAGCTTCCTCGCCCGCCTGGGCCTGGAGGAACGGGTCCGCATGCTGATGCAGAACGCCACGCCCGAGCAGGCCGCCCAT CTGGCCAGCGGCGCACGGCGCTTGATCGATCCCGGGGAAATGGGCACCCTGTTCAAGGTCCTGGCGCTCGCCGCCCCTCT GCTGCCCGTCCCCCCCGGCCTGGAACACGATTAA
Upstream 100 bases:
>100_bases GCGTTGAGCGCCCCGAAGCGACGACGGAGCGCAGCGGAGAAGGGAAGCGGAGGAGCCAAGCGCACGGAGGCGCGCGCCCG GCGCTTGAGGGGCTGAAACA
Downstream 100 bases:
>100_bases ATGATCACCTTGTCGGCCCTCAACGAGTTTGTTCGCATCCGCCACGGTTTCTTCACTCGCGAAGGCGGCGTGTCGGAAGG CCTTTACGCCTCGCTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGELIGLWCALVWQSMGAPKRVVL AEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLRNRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIR QLEKAGGVWRERVVALDEAGAFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARLGLEERVRMLMQNATPEQAAH LASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD
Sequences:
>Translated_357_residues MTLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGELIGLWCALVWQSMGAPKRVVL AEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLRNRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIR QLEKAGGVWRERVVALDEAGAFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARLGLEERVRMLMQNATPEQAAH LASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD >Mature_356_residues TLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGELIGLWCALVWQSMGAPKRVVLA EIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLRNRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIRQ LEKAGGVWRERVVALDEAGAFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYGK SAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARLGLEERVRMLMQNATPEQAAHL ASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=364, Percent_Identity=35.4395604395604, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI145701028, Length=340, Percent_Identity=28.5294117647059, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI193211224, Length=369, Percent_Identity=34.9593495934959, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24645885, Length=372, Percent_Identity=38.9784946236559, Blast_Score=243, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37740; Mature: 37609
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGEL CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IGLWCALVWQSMGAPKRVVLAEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLR HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHH NRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIRQLEKAGGVWRERVVALDEAG HHHHHHHHHCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC AFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG CEEEECCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARL CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHC GLEERVRMLMQNATPEQAAHLASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGEL CHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IGLWCALVWQSMGAPKRVVLAEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLR HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHH NRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIRQLEKAGGVWRERVVALDEAG HHHHHHHHHCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC AFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG CEEEECCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARL CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHC GLEERVRMLMQNATPEQAAHLASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA