| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309594
Identifier: 83309594
GI number: 83309594
Start: 527873
End: 529633
Strand: Reverse
Name: 83309594
Synonym: amb0495
Alternate gene names: NA
Gene position: 529633-527873 (Counterclockwise)
Preceding gene: 83309595
Following gene: 83309593
Centisome position: 10.66
GC content: 74.22
Gene sequence:
>1761_bases ATGTGCTCGGCCATCCCGCCGGCTCCGCCTCCGGTCGCCCTGCCTCCCCAGGTCAGCGCGCCGGTAGTGCTGAGCGTGGT GGCCGACAAGGGTGCCGCCGAGGCCCTGGCCAAGCTGCAGGCCGGTGCGGTGCTGGCCGCCACCCTGACAATGTCCGAGG GCAAGGGGGTGGTCCAGGTGATGACCGCCGACGGGAGCAGCCTGTCGCTGCGGCTGCCGCCGGGCCAACCCCTGCCGCCC GACGGCGCCCAACTGGCCCTGCAATTCATCTCGCAGAACGGCCTGCCCGCCTTCAAGCTGCTGTCCATCAACGGCCGCCC CATGGGCCTGGCCCCCCAGCCCCTCCTGCCGCCCAATCCGCCCGACCTCGCCGCCCTGCTGGGCAATAGTGGCGCCAAGG CGGGACAGGCCCAGAATCCAGCCGCCCCATCGCCCCTGGCCCAGCCCGGCCCGGCCGGAGCGCCCGTGACGGCCTCGCCC GGACTGGCGGCGGGGCCGGTGGGCCTGACCGCCACCGTCATCCGCTCCGGCCCGCCCGGCGCGGTGATGCTGCCCCCCAA TGCTGCCACGCCGGGTCTGGACATGGCCCAGCCCCTGCCCACGGCGCTGACCAACCTTGCCGCCGGCACCCTTCTCACGG TGCGCATCGCCGCCATGGCTCCGCCCGGCCAGGGCGCGGTAAGTGGCGGCCAGCCCATTCCCACCGCCACGGCGCAACCG GCCGCCGCTCCGCAGCCCCAGACGGAGCCGGTCTCGGCCCGGCCCGCCATCGCCACCGGGCCGGCGGTCGCGCCGCCCGC AGGCCATGCCTCTCCTGCCATCGCCCAGCCCACCATGCCGGGGACGGCCCCGGCCCTTCCCGCCGGCCCTCCCGTCATGC CGCCCGCCCCGGCCGCTCCTCCGTCCCAGACCGTGACCCTGCCCGCCATCGTGGTGGCCCAGCCGGCCGGCGGCGCCGCC GTGATCCAAAGCCCGGCCGGAACCCTGTCACTGGACGTGGGCATGCCCATGCCCATCGGCAGCGTGCTGCGCCTGGAGGT GATCGGCCGCCCCCTGCCGCCGCCACCGCTGGCGCCAGCCGCCGGCCCGCCCCAGGGGCTGAGCCCCGGCGGCTGGCCCA CCCTGGATCAGGCGGTGGACGCCCTGCTGCAATCGGACCGTCAGGCCGCCGAGCAGCTGATGCGGATGATCCCCCAGGCG GGTCCCCGTCTGGCGGCGGCCATGTCCCTGTTCGCCGGCGCCGTGCGCTCGGGCGATGCCCGCCAGTTGCTCAGCGAGCC GGTGACCCGGGGCCTGGAAAAGGCCGGGCGCCGGGATCTGGCCGACAAGCTGAAGAAGGAGTTCCTCGATCTGGCCGAGG AGGCCACCCGGCCCATGGGGCGGGGCGACTGGCAGGCCATCACCCTGCCCTTCGCCCATGGCGCCAATGTGGACCCCATC GACCTCTACGTCCACCGCCCGCCCAACGAGGACGAGGGCGGCGGCAAGAAGGGCAGCGAACAGCGCTTCATCCTGGAGGT GCGCATGAGCGTGCTGGGCCGCATTCAGCTGGACGGGCTGGTGCAGAAGGACACCAAGCGCTTCGACCTGATCGTGCGCA CCGCCGAGCCGCTGCCCGCCGCCATGTGCCGCGACATCGCCGGCATCTTCGCCGAATGCGGCCAGATGACCGGCATCAAG GGGCAGGTTTCCTTCCAGGCGGGGCGGTCTTTCGTCGACCTGCCGCCGGCCGGCGCACCGGCAACGCAAATCGTGGTATG A
Upstream 100 bases:
>100_bases CGCAACCAGACGCCCATCATGATGCGCTCGCCCAACGCCGAGGCCGCCGCCGATGTCGAGGCCATCGTCGAGCGCCTGAT CCGCTCGCGCTAGCACCGCC
Downstream 100 bases:
>100_bases TCCCTGCGCGGCTTTTCCACTCCCCCGACCGATGGCATAGGCTTTGCTTGAAGAACCCGGCAAACCACTGGCCCAGGCAC AAGCACCAATCGGCATGAAC
Product: DNA polymerase III
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MCSAIPPAPPPVALPPQVSAPVVLSVVADKGAAEALAKLQAGAVLAATLTMSEGKGVVQVMTADGSSLSLRLPPGQPLPP DGAQLALQFISQNGLPAFKLLSINGRPMGLAPQPLLPPNPPDLAALLGNSGAKAGQAQNPAAPSPLAQPGPAGAPVTASP GLAAGPVGLTATVIRSGPPGAVMLPPNAATPGLDMAQPLPTALTNLAAGTLLTVRIAAMAPPGQGAVSGGQPIPTATAQP AAAPQPQTEPVSARPAIATGPAVAPPAGHASPAIAQPTMPGTAPALPAGPPVMPPAPAAPPSQTVTLPAIVVAQPAGGAA VIQSPAGTLSLDVGMPMPIGSVLRLEVIGRPLPPPPLAPAAGPPQGLSPGGWPTLDQAVDALLQSDRQAAEQLMRMIPQA GPRLAAAMSLFAGAVRSGDARQLLSEPVTRGLEKAGRRDLADKLKKEFLDLAEEATRPMGRGDWQAITLPFAHGANVDPI DLYVHRPPNEDEGGGKKGSEQRFILEVRMSVLGRIQLDGLVQKDTKRFDLIVRTAEPLPAAMCRDIAGIFAECGQMTGIK GQVSFQAGRSFVDLPPAGAPATQIVV
Sequences:
>Translated_586_residues MCSAIPPAPPPVALPPQVSAPVVLSVVADKGAAEALAKLQAGAVLAATLTMSEGKGVVQVMTADGSSLSLRLPPGQPLPP DGAQLALQFISQNGLPAFKLLSINGRPMGLAPQPLLPPNPPDLAALLGNSGAKAGQAQNPAAPSPLAQPGPAGAPVTASP GLAAGPVGLTATVIRSGPPGAVMLPPNAATPGLDMAQPLPTALTNLAAGTLLTVRIAAMAPPGQGAVSGGQPIPTATAQP AAAPQPQTEPVSARPAIATGPAVAPPAGHASPAIAQPTMPGTAPALPAGPPVMPPAPAAPPSQTVTLPAIVVAQPAGGAA VIQSPAGTLSLDVGMPMPIGSVLRLEVIGRPLPPPPLAPAAGPPQGLSPGGWPTLDQAVDALLQSDRQAAEQLMRMIPQA GPRLAAAMSLFAGAVRSGDARQLLSEPVTRGLEKAGRRDLADKLKKEFLDLAEEATRPMGRGDWQAITLPFAHGANVDPI DLYVHRPPNEDEGGGKKGSEQRFILEVRMSVLGRIQLDGLVQKDTKRFDLIVRTAEPLPAAMCRDIAGIFAECGQMTGIK GQVSFQAGRSFVDLPPAGAPATQIVV >Mature_586_residues MCSAIPPAPPPVALPPQVSAPVVLSVVADKGAAEALAKLQAGAVLAATLTMSEGKGVVQVMTADGSSLSLRLPPGQPLPP DGAQLALQFISQNGLPAFKLLSINGRPMGLAPQPLLPPNPPDLAALLGNSGAKAGQAQNPAAPSPLAQPGPAGAPVTASP GLAAGPVGLTATVIRSGPPGAVMLPPNAATPGLDMAQPLPTALTNLAAGTLLTVRIAAMAPPGQGAVSGGQPIPTATAQP AAAPQPQTEPVSARPAIATGPAVAPPAGHASPAIAQPTMPGTAPALPAGPPVMPPAPAAPPSQTVTLPAIVVAQPAGGAA VIQSPAGTLSLDVGMPMPIGSVLRLEVIGRPLPPPPLAPAAGPPQGLSPGGWPTLDQAVDALLQSDRQAAEQLMRMIPQA GPRLAAAMSLFAGAVRSGDARQLLSEPVTRGLEKAGRRDLADKLKKEFLDLAEEATRPMGRGDWQAITLPFAHGANVDPI DLYVHRPPNEDEGGGKKGSEQRFILEVRMSVLGRIQLDGLVQKDTKRFDLIVRTAEPLPAAMCRDIAGIFAECGQMTGIK GQVSFQAGRSFVDLPPAGAPATQIVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58779; Mature: 58779
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSAIPPAPPPVALPPQVSAPVVLSVVADKGAAEALAKLQAGAVLAATLTMSEGKGVVQV CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEEEEECCCCCEEEE MTADGSSLSLRLPPGQPLPPDGAQLALQFISQNGLPAFKLLSINGRPMGLAPQPLLPPNP EECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCC PDLAALLGNSGAKAGQAQNPAAPSPLAQPGPAGAPVTASPGLAAGPVGLTATVIRSGPPG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC AVMLPPNAATPGLDMAQPLPTALTNLAAGTLLTVRIAAMAPPGQGAVSGGQPIPTATAQP EEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCC AAAPQPQTEPVSARPAIATGPAVAPPAGHASPAIAQPTMPGTAPALPAGPPVMPPAPAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQTVTLPAIVVAQPAGGAAVIQSPAGTLSLDVGMPMPIGSVLRLEVIGRPLPPPPLAPA CCCEEEEEEEEEECCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCC AGPPQGLSPGGWPTLDQAVDALLQSDRQAAEQLMRMIPQAGPRLAAAMSLFAGAVRSGDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH RQLLSEPVTRGLEKAGRRDLADKLKKEFLDLAEEATRPMGRGDWQAITLPFAHGANVDPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCE DLYVHRPPNEDEGGGKKGSEQRFILEVRMSVLGRIQLDGLVQKDTKRFDLIVRTAEPLPA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHCCCEEEEEEECCCCCHH AMCRDIAGIFAECGQMTGIKGQVSFQAGRSFVDLPPAGAPATQIVV HHHHHHHHHHHHHHCCCCCCEEEEHHHCCEEEECCCCCCCCCEEEC >Mature Secondary Structure MCSAIPPAPPPVALPPQVSAPVVLSVVADKGAAEALAKLQAGAVLAATLTMSEGKGVVQV CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEEEEECCCCCEEEE MTADGSSLSLRLPPGQPLPPDGAQLALQFISQNGLPAFKLLSINGRPMGLAPQPLLPPNP EECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCC PDLAALLGNSGAKAGQAQNPAAPSPLAQPGPAGAPVTASPGLAAGPVGLTATVIRSGPPG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC AVMLPPNAATPGLDMAQPLPTALTNLAAGTLLTVRIAAMAPPGQGAVSGGQPIPTATAQP EEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCC AAAPQPQTEPVSARPAIATGPAVAPPAGHASPAIAQPTMPGTAPALPAGPPVMPPAPAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQTVTLPAIVVAQPAGGAAVIQSPAGTLSLDVGMPMPIGSVLRLEVIGRPLPPPPLAPA CCCEEEEEEEEEECCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCC AGPPQGLSPGGWPTLDQAVDALLQSDRQAAEQLMRMIPQAGPRLAAAMSLFAGAVRSGDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH RQLLSEPVTRGLEKAGRRDLADKLKKEFLDLAEEATRPMGRGDWQAITLPFAHGANVDPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCE DLYVHRPPNEDEGGGKKGSEQRFILEVRMSVLGRIQLDGLVQKDTKRFDLIVRTAEPLPA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHCCCEEEEEEECCCCCHH AMCRDIAGIFAECGQMTGIKGQVSFQAGRSFVDLPPAGAPATQIVV HHHHHHHHHHHHHHCCCCCCEEEEHHHCCEEEECCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA