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The map label for this gene is capA [H]

Identifier: 82752242

GI number: 82752242

Start: 2695118

End: 2695804

Strand: Reverse

Name: capA [H]

Synonym: SAB2539c

Alternate gene names: 82752242

Gene position: 2695804-2695118 (Counterclockwise)

Preceding gene: 82752243

Following gene: 82752241

Centisome position: 98.3

GC content: 29.26

Gene sequence:

>687_bases
ATGATTGATTATGTGGAGGAAACCATGAAAGAAAAGTTTGATTTAGTAAAACTATTAAATATTCTAAAGAAGAATATTAA
ATTATTGCTTATTTTACCGGCAATATGTCTTGTAGTAAGTGCGGCATTAACCTTTTTTGTTATGCCTGACAAATATACTG
CTTCTACTCAAATATTAGTAAACATGAAAAAGTCCTCAAGTGATTTAGCTTTCCAAAATGTTCAAAGTAGTTTGCAGTCC
GTTAATACATATACGGAAATTATCAAAAGTCCAAGAATTCTAGATAAAGTATCTAGAGAGTTTGACGGTCAGTATTCAAC
AGCTGAGTTGAATTCGTTTTTAAAAGTAACCAATCAAACAAACTCTCAAATTATTACTGTATCAGTTACAACTGGGAATA
AATCTGAATCTGACAAAATTGTTAATAGAATATCTAAAGTTTTTGCACATGACATGCCTAAAATTATGAGTGTTGATAAT
GTTACAATACTTTCCTCAGCACATGATAATGCTGTAAAAGTATCTCCAATAGTATCTGTCAACTTAGTGATCAGTATCAT
TGTTGGTATTGTTTTAGCAATATTGATTATTTTCTTAAAAGAATTATTAGATAAGCGTATTAAGACGGAAGAAGATGTTG
AATCGCAACTAGGATTACCTATTTTAGGTTCAATACAAAAATTTTAA

Upstream 100 bases:

>100_bases
AATATTTATATAAAAAATTAGAGAAAATGTAGTTGTGTATTTTTGAGGTCGTTAAACTAGATATAATTGTCCGATTTATA
AAACATACATAATGAATACA

Downstream 100 bases:

>100_bases
TTTACGAGGAATTACCATGACGAATAAACGAAGAAGTACATCAAGTTTAATTGTCCATGAACAACCAAAGTCACCTATTA
GCGAGAAATTTCGAGGCATA

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIDYVEETMKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQS
VNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDN
VTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF

Sequences:

>Translated_228_residues
MIDYVEETMKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQS
VNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDN
VTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF
>Mature_228_residues
MIDYVEETMKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQS
VNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDN
VTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 25349; Mature: 25349

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDYVEETMKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
NMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQT
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSV
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCEEECHHHHH
NLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MIDYVEETMKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
NMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQT
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSV
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCEEECHHHHH
NLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA