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The map label for this gene is ybeC [H]

Identifier: 82752045

GI number: 82752045

Start: 2467092

End: 2468729

Strand: Direct

Name: ybeC [H]

Synonym: SAB2332

Alternate gene names: 82752045

Gene position: 2467092-2468729 (Clockwise)

Preceding gene: 82752037

Following gene: 82752046

Centisome position: 89.96

GC content: 36.14

Gene sequence:

>1638_bases
ATGAATAAAGACAAGCAATTGCACAACGACAAAATCAATCTATCCCAATTAGTCTTATTAGGGTTAGGTTCTTTAATAGG
ATCAGGTTGGCTATTTGGTGCGTGGGAAGCATCATCAATAGCTGGACCAGCAGCAATCATATCATGGGTTCTTGGATTCC
TAGTCATTGGAACCATTGCCTATAACTACATTGAAATCGGCACAATGTTTCCTCAATCAGGTGGCATGAGTAACTATGCC
CAGTATACACATGGCTCATTATTAGGCTTTATTGCTGCTTGGGCGAATTGGGTGTCTTTGGTGACAATAATACCTATCGA
AGCTGTGTCAGCTGTTCAATATATGAGTTCTTGGCCGTGGCACTGGGCGGAACCAATGAAACATTTAATGGAAAATGGCT
CTATTAGCACATACGGATTGCTAGCTGTATATCTCATCATTGTTATTTTTTCATTATTAAACTATTGGTCCGTAAAACTT
TTAACATCATTTACGAGTTTAATTTCTGTATTTAAATTAGGCGTACCCATGTTAACCATCATCATGTTGATGTTATCAGG
ATTCGACACTTCAAATTACGGCCATTCGGCAAGCACATTTATGCCTTACGGAAGTGCACCGATTTTTGCTGCAACAACAG
CATCAGGGATTATTTTTTCATTCAATTCATTCCAGACAATTATTAATATGGGTTCAGAAATTAAAAATCCCGAAAAAAAT
ATCGCAAGAGGCATCGCTATTTCACTATCAATCAGTGCAGTGTTGTACATCATTTTACAAAGTACGTTTATCACTTCTAT
GCCTCAATCAATGTTACAACATAGTGGATGGAATGGCATCAACTTCAATTCACCATTTGCTGATTTAGCTATCTTATTAG
GAATTAATTGGCTCGCAATTTTACTATATATTGAAGCTTTTGTATCACCATTTGGTACTGGCGTGTCATTTGTCGCCGTT
ACAGGTCGAGTTTTACGAGCAATGGAGAAAAATGGACATATCCCTAAATTTCTTGGGAAGATGAATGAAAAATATCATAT
TCCACGTGTAGCAATCATCTTTAATGCCATCATTAGTATGATTATGGTTACGTTATTTAGAGATTGGGGTACGCTAGCAG
CAGTTATTTCTACTGCAACTTTAGTAGCCTATTTAACTGGCTCAACGACAGTGATTGCATTAAGAAAAACGGGACCAACG
ATGACTCGTCCATTTAGAGCAAAAATTTTAAAAGTAATGGCACCATTATCATTTGTATTAGCTTCATTAGCTATATATTG
GGCAATGTGGCCAACAACGGCTGAAGTTATTTTAATCATTATACTTGGATTACCAATCTACTTCTTCTATGAATATCGTA
TGAATTGGCGTAATACAAAGAAACAAATTGGTGGTAGCTTATGGATTATTGTATATTTAATCGTGCTATCAATACTATCA
TTTATAGGAAGCAAAGAATTTAAAGGCTTAAATATGATTCACTATCCATTTGACTTTATCGTTATTATTATTGTGGCGCT
TATCTTCTATTACATCGGTACAACGAGTTCATTTGAAAGCGTCTATTTCCGTCGCGCTACACGAATCAATACAAAGATGC
GCGAGTCACTAAATAATGAATCAAAGTCATCTCATTAA

Upstream 100 bases:

>100_bases
TTTTGCATTCTTACAAAAAATGCATTTGACTATTATTATAATAAGCGTATAATTGTCGCATATTATTTTTTGTATTTTTG
GCAATAACGAAGGAGTATTT

Downstream 100 bases:

>100_bases
ATATTTTAAAATGCAGTGCCATATATGATTTCAACACACACATTAACCAACCATTGATTTCAACATCTTGGTTGGTTTTT
TATTTTGAAGATGGGTTATA

Product: amino acid transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIAYNYIEIGTMFPQSGGMSNYA
QYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPWHWAEPMKHLMENGSISTYGLLAVYLIIVIFSLLNYWSVKL
LTSFTSLISVFKLGVPMLTIIMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAILLYIEAFVSPFGTGVSFVAV
TGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISMIMVTLFRDWGTLAAVISTATLVAYLTGSTTVIALRKTGPT
MTRPFRAKILKVMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNESKSSH

Sequences:

>Translated_545_residues
MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIAYNYIEIGTMFPQSGGMSNYA
QYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPWHWAEPMKHLMENGSISTYGLLAVYLIIVIFSLLNYWSVKL
LTSFTSLISVFKLGVPMLTIIMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAILLYIEAFVSPFGTGVSFVAV
TGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISMIMVTLFRDWGTLAAVISTATLVAYLTGSTTVIALRKTGPT
MTRPFRAKILKVMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNESKSSH
>Mature_545_residues
MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIAYNYIEIGTMFPQSGGMSNYA
QYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPWHWAEPMKHLMENGSISTYGLLAVYLIIVIFSLLNYWSVKL
LTSFTSLISVFKLGVPMLTIIMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAILLYIEAFVSPFGTGVSFVAV
TGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISMIMVTLFRDWGTLAAVISTATLVAYLTGSTTVIALRKTGPT
MTRPFRAKILKVMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNESKSSH

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=435, Percent_Identity=23.6781609195402, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI114326544, Length=419, Percent_Identity=26.0143198090692, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI114326550, Length=419, Percent_Identity=26.0143198090692, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI7657683, Length=433, Percent_Identity=24.2494226327945, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI33286428, Length=467, Percent_Identity=24.1970021413276, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI187423910, Length=456, Percent_Identity=22.5877192982456, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI7657591, Length=456, Percent_Identity=22.5877192982456, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI181337167, Length=401, Percent_Identity=26.6832917705736, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI115648063, Length=472, Percent_Identity=24.1525423728814, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI115648022, Length=472, Percent_Identity=24.1525423728814, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI186910308, Length=461, Percent_Identity=25.3796095444685, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI186910306, Length=461, Percent_Identity=25.3796095444685, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI186910304, Length=461, Percent_Identity=25.3796095444685, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI87082250, Length=472, Percent_Identity=24.5762711864407, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081915, Length=381, Percent_Identity=24.1469816272966, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1786302, Length=379, Percent_Identity=22.4274406332454, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1786789, Length=411, Percent_Identity=25.7907542579075, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=404, Percent_Identity=23.5148514851485, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17531343, Length=422, Percent_Identity=22.5118483412322, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17533459, Length=406, Percent_Identity=25.8620689655172, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17540018, Length=449, Percent_Identity=22.4944320712695, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI32566699, Length=393, Percent_Identity=25.1908396946565, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24667468, Length=412, Percent_Identity=25, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI221512776, Length=400, Percent_Identity=26.5, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24666159, Length=400, Percent_Identity=26.5, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24651635, Length=461, Percent_Identity=24.7288503253796, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24651633, Length=461, Percent_Identity=24.7288503253796, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357367, Length=468, Percent_Identity=23.9316239316239, Blast_Score=83, Evalue=6e-16,
Organism=Drosophila melanogaster, GI221331183, Length=490, Percent_Identity=22.2448979591837, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17647653, Length=490, Percent_Identity=22.2448979591837, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24664379, Length=490, Percent_Identity=22.2448979591837, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI45550968, Length=486, Percent_Identity=24.2798353909465, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI19921172, Length=486, Percent_Identity=24.2798353909465, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24668806, Length=431, Percent_Identity=25.754060324826, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356285, Length=431, Percent_Identity=25.754060324826, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24668802, Length=431, Percent_Identity=25.754060324826, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281366235, Length=410, Percent_Identity=24.1463414634146, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI116007820, Length=410, Percent_Identity=24.1463414634146, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 60548; Mature: 60548

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HWAEPMKHLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCHHCCCCHHH
IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHH
IMVTLFRDWGTLAAVISTATLVAYLTGSTTVIALRKTGPTMTRPFRAKILKVMAPLSFVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH
FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
HHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SKSSH
CCCCC
>Mature Secondary Structure
MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HWAEPMKHLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCHHCCCCHHH
IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHH
IMVTLFRDWGTLAAVISTATLVAYLTGSTTVIALRKTGPTMTRPFRAKILKVMAPLSFVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH
FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
HHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SKSSH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]