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The map label for this gene is bioW [H]

Identifier: 82752019

GI number: 82752019

Start: 2434647

End: 2435339

Strand: Reverse

Name: bioW [H]

Synonym: SAB2304c

Alternate gene names: 82752019

Gene position: 2435339-2434647 (Counterclockwise)

Preceding gene: 82752020

Following gene: 82752018

Centisome position: 88.8

GC content: 33.33

Gene sequence:

>693_bases
ATGTATAGTATAAAAATGCGTTCTAGCAATCAAGATGTTCATATTAGTGGTGCTGAAACGATTTGTGAGTTTGACAAAAT
AGAACAGACGGTACAAAGGTTTTATAATAAAGGTTTTTTTCATGAAAATGGGCAACCGGATTTTCTCAATATAAAAATAC
AAAAAATCATGGAACCGATTCAACAAATAAAAGCATTACAAATTATTGAGGATGATAAAGCAAATCTCCAACATTTAACA
CAAGAATGTGGTGTCACTGAACAAGCGCTAAATCAAGGGATGACATATATTAAAAATGAAACGGTTTATACAGGAGCTAT
TATTCTATCTGCTATATCTGGTAAACGTTTAGATTCATTTGGACAAAGGGGGATTAGGGCAACGCATTTTTCGTTTGAAG
ATATGAATAATAAAGGTGATCTTAATGAAAGAGTGACTGATGCCTTAGCAATTGCTAGTTGTATCAATGCGCATCCGTAT
GTCAAAGGAGAACTTTGCGTGTCCGATGACTTAACGTATACAACAGGTTATTTTGCCTCTGCTAAAATTGGTTACCATCG
ATTATTTGATATTAAACCAGTTAATACGAGATATGGAGGCAGAATAATATTTGTGGACGATCGTATTGATTTAAATCATT
ACATATCATTTTTAGAAAGCACACCGAAGCAAGTTGTTTATGAAACGGTATAG

Upstream 100 bases:

>100_bases
ACTAAGCCAATGTTAAGAATATCATTGTCGTATTTTCATACTGAACAAGATGTAGATAGGTTGTTTGAAATTTTGCATCA
AGAAGATTGAGGTGATCGTC

Downstream 100 bases:

>100_bases
GGGTTTTAGTATGATATCAAAAGATATTACTCAAATTAGTGTCATTGCTGCGATTTTAACCATTTTGGCAGTTTTGAAAA
TACCATCCATTATACCAGGA

Product: 6-carboxyhexanoate--CoA ligase

Products: NA

Alternate protein names: Pimeloyl-CoA synthase [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPIQQIKALQIIEDDKANLQHLT
QECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSFGQRGIRATHFSFEDMNNKGDLNERVTDALAIASCINAHPY
VKGELCVSDDLTYTTGYFASAKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFLESTPKQVVYETV

Sequences:

>Translated_230_residues
MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPIQQIKALQIIEDDKANLQHLT
QECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSFGQRGIRATHFSFEDMNNKGDLNERVTDALAIASCINAHPY
VKGELCVSDDLTYTTGYFASAKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFLESTPKQVVYETV
>Mature_230_residues
MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPIQQIKALQIIEDDKANLQHLT
QECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSFGQRGIRATHFSFEDMNNKGDLNERVTDALAIASCINAHPY
VKGELCVSDDLTYTTGYFASAKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFLESTPKQVVYETV

Specific function: Transforms pimelate into pimeloyl-CoA [H]

COG id: COG1424

COG function: function code H; Pimeloyl-CoA synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005499
- ProDom:   PD017229 [H]

Pfam domain/function: PF03744 BioW [H]

EC number: =6.2.1.14 [H]

Molecular weight: Translated: 26179; Mature: 26179

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPI
CEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
QQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSF
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCHHHCCCCEEHHHHHHHHHCCCHHHHH
GQRGIRATHFSFEDMNNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFAS
HHCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCEEE
AKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFLESTPKQVVYETV
CCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHEECC
>Mature Secondary Structure
MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPI
CEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
QQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSF
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCHHHCCCCEEHHHHHHHHHCCCHHHHH
GQRGIRATHFSFEDMNNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFAS
HHCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCEEE
AKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFLESTPKQVVYETV
CCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA