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The map label for this gene is fliY [C]

Identifier: 82752009

GI number: 82752009

Start: 2423615

End: 2424394

Strand: Reverse

Name: fliY [C]

Synonym: SAB2294c

Alternate gene names: 82752009

Gene position: 2424394-2423615 (Counterclockwise)

Preceding gene: 82752010

Following gene: 82752008

Centisome position: 88.4

GC content: 31.41

Gene sequence:

>780_bases
ATGAAAAGACTTTTATTTGTGATGATAGCTTTCGTTTTCATATTGGCTGCATGTGGAAACAATTCGTCGAAAGACAAGGA
AGCTAATAAAGATAGCAAGACAATTAATGTTGGTACTGAGGGGACTTATGCACCATTTAGTTTCCATGATAAAGATGGTA
AATTAACTGGTTACGATATTGATGTTATTAAAGCAGTAGCTAAAGAAGAAGGTTTAAAACTTAAATTTAATGAAACTTCT
TGGGATTCTATGTTTGCAGGTTTAGACGCAGGGCGTTTTGATGTAATCGCGAACCAAGTAGGTATTAATCCTGACAGAGA
AAAGAAATATAAATTTTCTAAGCCTTACACATTCTCAAGTGCTGTTTTAGTTATTCGTGAAAATAAAAAAGATATTAAAG
ATTTTGATGATGTTAAAGGTAAGAAGGTAGCACAAACATTCACATCTAATTATGGTAAATTAGCTAAGGATAAAGGTGCT
GATATTACAAAAGTTGATGGCTTTAACCAATCAATGGATTTATTATTGTCTAAGCGTGTTGATGGTACATTTAATGATAG
TCTGTCATACTTGGATTATAAAAAACAAAAACCTAATGCTAAGATCAAAGCAATCAAAGGTAATGCTGAACAAAGTAGAT
CTGCATTTGCATTTTCTAAAAAAGTAGATGATGAAACAGTTCAAAAATTCAATGATGGCTTGAAAAAAATCGAGGAAAAC
GGTGAATTAGCTAAAATAGGTAAGAAATGGTTTGGTCAAGATGTTTCTAAATCTAAATAG

Upstream 100 bases:

>100_bases
AAAGCTTTTTAGCAAAAGTTCAACATATTGACTTATCCGGCATTTCAGATTAAAATATTTTTATTCCGATTAGAATAATA
AGAATAAGGAGATATATTCT

Downstream 100 bases:

>100_bases
CGAACAACAACATGCGCTAGATGCTGCAAAACAAGCTTTTGGACCTATGCTAGAAGGTTTGGTCAAATATTCAATTCCTA
TTACATTAGTTACATTTGTT

Product: extracellular amino acid binding ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKRLLFVMIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETS
WDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENKKDIKDFDDVKGKKVAQTFTSNYGKLAKDKGA
DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKVDDETVQKFNDGLKKIEEN
GELAKIGKKWFGQDVSKSK

Sequences:

>Translated_259_residues
MKRLLFVMIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETS
WDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENKKDIKDFDDVKGKKVAQTFTSNYGKLAKDKGA
DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKVDDETVQKFNDGLKKIEEN
GELAKIGKKWFGQDVSKSK
>Mature_259_residues
MKRLLFVMIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETS
WDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENKKDIKDFDDVKGKKVAQTFTSNYGKLAKDKGA
DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKVDDETVQKFNDGLKKIEEN
GELAKIGKKWFGQDVSKSK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=231, Percent_Identity=37.6623376623377, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1787088, Length=258, Percent_Identity=28.2945736434109, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1787085, Length=257, Percent_Identity=25.6809338521401, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787031, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788648, Length=236, Percent_Identity=25, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788649, Length=228, Percent_Identity=25, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28944; Mature: 28944

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLFVMIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCEECCHH
DVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSS
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHCEECCCCCEECC
AVLVIRENKKDIKDFDDVKGKKVAQTFTSNYGKLAKDKGADITKVDGFNQSMDLLLSKRV
EEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
DGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKVDDETVQKFNDGLKKIEEN
CCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GELAKIGKKWFGQDVSKSK
CCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRLLFVMIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCEECCHH
DVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSS
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHCEECCCCCEECC
AVLVIRENKKDIKDFDDVKGKKVAQTFTSNYGKLAKDKGADITKVDGFNQSMDLLLSKRV
EEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
DGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKVDDETVQKFNDGLKKIEEN
CCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GELAKIGKKWFGQDVSKSK
CCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]