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The map label for this gene is ynfA [C]

Identifier: 82751932

GI number: 82751932

Start: 2348092

End: 2348418

Strand: Reverse

Name: ynfA [C]

Synonym: SAB2216c

Alternate gene names: 82751932

Gene position: 2348418-2348092 (Counterclockwise)

Preceding gene: 82751933

Following gene: 82751931

Centisome position: 85.63

GC content: 38.53

Gene sequence:

>327_bases
ATGTTATATCCGATTTTTATATTTATATTAGCTGGCTTATGTGAAATAGGTGGGGGATACCTGATATGGCTGTGGCTTAG
GGAAGGACAGTGTTCACTTGTTGGGCTAATAGGCGGTGCGATACTCATGTTATATGGTGTCATTGCGACATTTCAATCAT
TTCCATCATTCGGAAGAGTATATGCAGCATATGGTGGCGTATTTATCATCATGAGTTTGATTTTTGCGATGGTCGTAGAT
AAACAAATGCCAGATAAATATGATGTTATCGGTGCAATCATTTGTATTGTAGGTGTTTTAGTAATGTTGCTACCCAGCAG
AGCTTGA

Upstream 100 bases:

>100_bases
AACGAACTTTTTAAAATGGGAATGTGAAGTAAGAAGAAATGTAAACAAATGATATGTAGCCGATAGATTATTGGTAGCAA
ATGTGTGATGGAGTGATTTC

Downstream 100 bases:

>100_bases
ACACTTGTGGTTAGAAGGGAGAAGTAAAAATGATAGTTGAAGTTGAGCACCAAAGACAAGGTGTAGATTTAATCAAAATT
GATAATGATGAAACTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLYPIFIFILAGLCEIGGGYLIWLWLREGQCSLVGLIGGAILMLYGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVD
KQMPDKYDVIGAIICIVGVLVMLLPSRA

Sequences:

>Translated_108_residues
MLYPIFIFILAGLCEIGGGYLIWLWLREGQCSLVGLIGGAILMLYGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVD
KQMPDKYDVIGAIICIVGVLVMLLPSRA
>Mature_108_residues
MLYPIFIFILAGLCEIGGGYLIWLWLREGQCSLVGLIGGAILMLYGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVD
KQMPDKYDVIGAIICIVGVLVMLLPSRA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=102, Percent_Identity=38.2352941176471, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 11775; Mature: 11775

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPIFIFILAGLCEIGGGYLIWLWLREGQCSLVGLIGGAILMLYGVIATFQSFPSFGRV
CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
YAAYGGVFIIMSLIFAMVVDKQMPDKYDVIGAIICIVGVLVMLLPSRA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLYPIFIFILAGLCEIGGGYLIWLWLREGQCSLVGLIGGAILMLYGVIATFQSFPSFGRV
CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
YAAYGGVFIIMSLIFAMVVDKQMPDKYDVIGAIICIVGVLVMLLPSRA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]