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The map label for this gene is traP

Identifier: 82751487

GI number: 82751487

Start: 1893152

End: 1893655

Strand: Direct

Name: traP

Synonym: SAB1766

Alternate gene names: 82751487

Gene position: 1893152-1893655 (Clockwise)

Preceding gene: 82751481

Following gene: 82751490

Centisome position: 69.03

GC content: 28.77

Gene sequence:

>504_bases
ATGAAGAAATTATATACATCTTATGGCACATATGGATTTTTAAATCAGATAAAAATCAATAATCCATCTCATCATTTATT
CCAATTTTCAACTGCTGATTCATCGGTGATTTTTGAAGAAACTGAAGAAAATACTGTACTGAAATCACCTTCAATATATG
AAGTTATTAAAGAAATAGGCGCATTCAATGAAGATCATTTTTATTGCGCAATTTTTATTCCGTCAACTGAAGACCATGTT
TATCAACTTGAAAAGAAATTAATCAGTGTTGATGACAATTTCAAAAACTTTGGTGGTTTTAAAAGTTATCGATTGCTGAG
ACCTGTTAAAGGTACAACATACAAAATTTACTTTGGCTTTGCTGATCGACAAACTTATGAAGACTTTAAAAATTCTGATG
CTTTTAAAGATCATTTTTCAAAAGAAGCATTAAGTCATTACTTTGGTTCAAGCGGACAACATTCAAGTTATTTTGAAAGA
TATTTATACCCAATAAAAGAATAG

Upstream 100 bases:

>100_bases
TCTTGCATGATTTATTATAGTAACTTTAACCGTATATTAATAGTGGTAATGACTAGTTTATCATCGTATAATAAATAAAA
ACATAAGGGGGACCTTTCAT

Downstream 100 bases:

>100_bases
ATTCGAAGAAAACTTCCATTGGTTATGCTGTTAACGTATAGATGCTAATGTAATCTGAACGCCGTATCATTTGGCGTTCA
ACATTACATGCACCTTTACA

Product: signal transduction protein

Products: NA

Alternate protein names: Target of RNAIII-activating protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTADSSVIFEETEENTVLKSPSIYEVIKEIGAFNEDHFYCAIFIPSTEDHV
YQLEKKLISVDDNFKNFGGFKSYRLLRPVKGTTYKIYFGFADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFER
YLYPIKE

Sequences:

>Translated_167_residues
MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTADSSVIFEETEENTVLKSPSIYEVIKEIGAFNEDHFYCAIFIPSTEDHV
YQLEKKLISVDDNFKNFGGFKSYRLLRPVKGTTYKIYFGFADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFER
YLYPIKE
>Mature_167_residues
MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTADSSVIFEETEENTVLKSPSIYEVIKEIGAFNEDHFYCAIFIPSTEDHV
YQLEKKLISVDDNFKNFGGFKSYRLLRPVKGTTYKIYFGFADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFER
YLYPIKE

Specific function: Signal transduction protein, which is a major regulator of staphylococcal pathogenesis. Phosphorylated TRAP leads to the activation of agr system and consequent RNAIII synthesis resulting in the expression of several virulence factors. Upregulates the exp

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane. Note=Membrane-associated

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRAP_STAAB (Q2YU04)

Other databases:

- EMBL:   AJ938182
- RefSeq:   YP_417228.1
- STRING:   Q2YU04
- EnsemblBacteria:   EBSTAT00000012292
- GeneID:   3794334
- GenomeReviews:   AJ938182_GR
- KEGG:   sab:SAB1766
- eggNOG:   NOG145299
- GeneTree:   EBGT00050000025290
- HOGENOM:   HBG693144
- OMA:   TAYEDFK
- ProtClustDB:   CLSK885591
- BioCyc:   SAUR273036:SAB1766-MONOMER
- GO:   GO:0016020
- GO:   GO:0009405
- InterPro:   IPR011008

Pfam domain/function: SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 19601; Mature: 19601

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTADSSVIFEETEENTVLKSPSIYEVIKEIG
CCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEECCCCHHHHHHHHC
AFNEDHFYCAIFIPSTEDHVYQLEKKLISVDDNFKNFGGFKSYRLLRPVKGTTYKIYFGF
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCEEEEEEEE
ADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFERYLYPIKE
CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTADSSVIFEETEENTVLKSPSIYEVIKEIG
CCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEECCCCHHHHHHHHC
AFNEDHFYCAIFIPSTEDHVYQLEKKLISVDDNFKNFGGFKSYRLLRPVKGTTYKIYFGF
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCEEEEEEEE
ADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFERYLYPIKE
CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA