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The map label for this gene is int [H]

Identifier: 82751481

GI number: 82751481

Start: 1886112

End: 1887176

Strand: Direct

Name: int [H]

Synonym: SAB1760

Alternate gene names: 82751481

Gene position: 1886112-1887176 (Clockwise)

Preceding gene: 82751480

Following gene: 82751487

Centisome position: 68.77

GC content: 30.23

Gene sequence:

>1065_bases
TTGTCAGTAAATAAATATGGTAAAGGTAAATGGTATTATGACTTTGGGCATGAAGGTAAACGATATAAAAAGAAAGGTTT
TACAACTAAACGTGAGGCAGTACAAGCAGAATCTATAGCACGTAATAAAGTGATGAAAGGTTTTAAAATTAATGATAAAA
CATCATTTATTGCCTATTATAATGATTGGATTAAAGTTAACAAAGAAGGTGTTATTACAGATAAAGCTTATGCAACTTTC
AAAAACGCAATCAATCAATTTAAAACATTTTTAGAAGTTGAAAATATTAGTAATCTTGTTTTATCAGATTTAAACACTAC
ATTTTATCGTAAATTTATTAAATGGTATGGTTCTAACCATTCAACAGAAACAGTCAGAAAGATTCACAACTGCTTAAAAC
AACCTATCGACGATGCGATTCAAGAAGGATTAATTCATAAAGATCCTACATATAAAGTTGTTGTTAAAGGTACTATTCCA
GCACAGCGTGAAGAAGAAAAGTTTATGAGTATTAAAGACTTTATCAATCTAAAGGAATATGTTTCTAACACCCCAATTCA
ATCTTATTTGTTTATTTATATTTTAATCATCACTGGTGGACGCTTTGGCGAAGTACAACGCTTATGTACCTCTGATTTAG
ATTATAAGAATTGTACGATTCATCTGCCAGGTACTAAAACAGAAACATCTGACAGAACGGTTGATATACCTCAAAATGAT
ATGAAAATTTTAAAAAATACCTTAGCTGAAATGCCAATTAGTCTAACTACCCAGTTATTCAACACTGGTACTTCACTAAT
TACGCATAACGCAGTAACAAAAGTTATGCAAAGATACTGTTTAGAAAAACGCATTGGCAAATACACATTGCACAGCATTA
GACACACCCATTGCTCTTATCTATTACACAATGATGTTTCTATTTATTATATTTCAAAAAGATTAGGTCACAAAAGCATA
AAGACTACTATGGATGTTTATTCTCATTTATTAGATGAAATCGAACAAAAAGAAAAAGAAAAAGCGCTCGATGCATTGGA
AAATATGACGGGAACGTTAAATTAA

Upstream 100 bases:

>100_bases
GACAATTTCAAACGTCAAAACAGCGAAGTGATTCAACAATAAAATTTCGGGTAGCTCGCCTACCCTTATTATTTTTTGCC
AATTTTGAGGAGGGATAATT

Downstream 100 bases:

>100_bases
TTTTCGGGGACGTTATATACAAAATAAGCATATCTTGGGAACGTTTCGGGAACGTTAAAATTCTTCTACGATATAAATCG
AAAGATAACGTAATATAACA

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSVNKYGKGKWYYDFGHEGKRYKKKGFTTKREAVQAESIARNKVMKGFKINDKTSFIAYYNDWIKVNKEGVITDKAYATF
KNAINQFKTFLEVENISNLVLSDLNTTFYRKFIKWYGSNHSTETVRKIHNCLKQPIDDAIQEGLIHKDPTYKVVVKGTIP
AQREEEKFMSIKDFINLKEYVSNTPIQSYLFIYILIITGGRFGEVQRLCTSDLDYKNCTIHLPGTKTETSDRTVDIPQND
MKILKNTLAEMPISLTTQLFNTGTSLITHNAVTKVMQRYCLEKRIGKYTLHSIRHTHCSYLLHNDVSIYYISKRLGHKSI
KTTMDVYSHLLDEIEQKEKEKALDALENMTGTLN

Sequences:

>Translated_354_residues
MSVNKYGKGKWYYDFGHEGKRYKKKGFTTKREAVQAESIARNKVMKGFKINDKTSFIAYYNDWIKVNKEGVITDKAYATF
KNAINQFKTFLEVENISNLVLSDLNTTFYRKFIKWYGSNHSTETVRKIHNCLKQPIDDAIQEGLIHKDPTYKVVVKGTIP
AQREEEKFMSIKDFINLKEYVSNTPIQSYLFIYILIITGGRFGEVQRLCTSDLDYKNCTIHLPGTKTETSDRTVDIPQND
MKILKNTLAEMPISLTTQLFNTGTSLITHNAVTKVMQRYCLEKRIGKYTLHSIRHTHCSYLLHNDVSIYYISKRLGHKSI
KTTMDVYSHLLDEIEQKEKEKALDALENMTGTLN
>Mature_353_residues
SVNKYGKGKWYYDFGHEGKRYKKKGFTTKREAVQAESIARNKVMKGFKINDKTSFIAYYNDWIKVNKEGVITDKAYATFK
NAINQFKTFLEVENISNLVLSDLNTTFYRKFIKWYGSNHSTETVRKIHNCLKQPIDDAIQEGLIHKDPTYKVVVKGTIPA
QREEEKFMSIKDFINLKEYVSNTPIQSYLFIYILIITGGRFGEVQRLCTSDLDYKNCTIHLPGTKTETSDRTVDIPQNDM
KILKNTLAEMPISLTTQLFNTGTSLITHNAVTKVMQRYCLEKRIGKYTLHSIRHTHCSYLLHNDVSIYYISKRLGHKSIK
TTMDVYSHLLDEIEQKEKEKALDALENMTGTLN

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 41029; Mature: 40897

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNKYGKGKWYYDFGHEGKRYKKKGFTTKREAVQAESIARNKVMKGFKINDKTSFIAYY
CCCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEE
NDWIKVNKEGVITDKAYATFKNAINQFKTFLEVENISNLVLSDLNTTFYRKFIKWYGSNH
ECEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STETVRKIHNCLKQPIDDAIQEGLIHKDPTYKVVVKGTIPAQREEEKFMSIKDFINLKEY
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
VSNTPIQSYLFIYILIITGGRFGEVQRLCTSDLDYKNCTIHLPGTKTETSDRTVDIPQND
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEECCCHH
MKILKNTLAEMPISLTTQLFNTGTSLITHNAVTKVMQRYCLEKRIGKYTLHSIRHTHCSY
HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHNDVSIYYISKRLGHKSIKTTMDVYSHLLDEIEQKEKEKALDALENMTGTLN
HHCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVNKYGKGKWYYDFGHEGKRYKKKGFTTKREAVQAESIARNKVMKGFKINDKTSFIAYY
CCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEE
NDWIKVNKEGVITDKAYATFKNAINQFKTFLEVENISNLVLSDLNTTFYRKFIKWYGSNH
ECEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STETVRKIHNCLKQPIDDAIQEGLIHKDPTYKVVVKGTIPAQREEEKFMSIKDFINLKEY
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
VSNTPIQSYLFIYILIITGGRFGEVQRLCTSDLDYKNCTIHLPGTKTETSDRTVDIPQND
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEECCCHH
MKILKNTLAEMPISLTTQLFNTGTSLITHNAVTKVMQRYCLEKRIGKYTLHSIRHTHCSY
HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHNDVSIYYISKRLGHKSIKTTMDVYSHLLDEIEQKEKEKALDALENMTGTLN
HHCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]