| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751318
Identifier: 82751318
GI number: 82751318
Start: 1721534
End: 1722850
Strand: Reverse
Name: 82751318
Synonym: SAB1589c
Alternate gene names: NA
Gene position: 1722850-1721534 (Counterclockwise)
Preceding gene: 82751319
Following gene: 82751316
Centisome position: 62.82
GC content: 30.9
Gene sequence:
>1317_bases ATGAACAATGTTATACTAAATACCTTTGATTTGAAAGATAAAAATATTATTTTTGACGGTAAACTTGAGAAAATTGAGTA TAAAGGGAGAAAGTGTTTCTTTTATTACGCAAAACTAATCTATACACCTGAGGTGTGCCCAAACTGCAATTGTAAAAATA TTAATGGTAATTTAATCAAAAATGGGTCTAAGACTTCTAGAATCACTATGCCTAAAATCTCCGAATATCCAACTTATATC ATGTTGCGTAAGCAACGTTTTAAATGTAAAACGTGCGAACGATACTTTACAGCTGAAACACCTGAAGTTGATAAATACTG TTTTATATCAAAAATAACACGATCAGCTGTACTTAATAAAGCAGCAGAAATTCGTTCTGAAAAATCTATAGCGAAATCCT GCTCTGTGTCAGCTACTACAGTTTCTCGTATCATTGATGAAGCCGCTCAATCGCTTCATCAATCGCCGTATTCTGCACTT CCTGAACATATCATGATGGATGAATTTAAAAGTGTTAAAAATGTTTCTGGGAAAATGAGTTTTATATACGCTGATGCACA AACGCATCATATTATTGATATTGTTGAAGATCGTAGATTAAGTGAGTTGAAAAAGTATTTTTATCGTTTTTCACTTAAAG CTAGAAAACGTGTGAAAACAGTTTCGATTGATATGCATGAAGGCTATATGACATTGATTAAAGAGATGTTTCCGAACGCT AAAATAGTCATCGATCGATTCCATATTGTTCAATTATTAAATCGTGCTTTAAATGGTATTCGAGTCACTGTTATGAATGA ATTAAGAGCGACGAATCAACCTTTATATAATAGGTTTAAAAGATATGCGAAATTACTATTAAAACCTGAAGAAGATTTAG AGGCATTTGAATATCATAAAGTAGCTTTATTTAAAGAACGGAAGACACAAAAGGGTATCGTCAAGTATTTATTAGATCAA GATGACTCGTTAAATGACGCCTACCAATATATCAATCAGCTACGATTCAAACTTAAACATAATGATTATGGAGGCTTTAT TCACGAATTAAAACATATGCCATTATCCCAAACGCATTCAGTTGTCCAACGAGCAATTAAGACACTTAACAAACATGTAT ACTTTATAAAAAATACATTTGATTATTACAATTTATCAAATGGTCCTTTAGAAGGTATAAATAACAAAATAAAATTAATT AAACGTACATCTTTTGGTTATGGAAGTTACAATCATTTGCGAAATCGAATATTATTATGTTCAAAACTTTACGCTCCAAA AAGTAAAAAGGAAGTTAAGCAATGTTTAGTTGCCTAA
Upstream 100 bases:
>100_bases TTTTCATCTGTCCGATTTTTTGATTTTGAATATAAAAAAAGCGCAATTATCTCTATAATTAAAAGTGCCTAAACAAATAA CTAAAGGAGATAATGCGCCT
Downstream 100 bases:
>100_bases CTTCCGATATTGAACGCATCAGTCCAATTTGACATAGAGCCAAAATAATCTTACTGCTGTTTTTAATATTTGGATGCTTT GTTGTGGTTGCTTTAAAAAG
Product: transposase
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Transposase; Transposase For IS; Truncated; Transposase Of; Truncated Transposase; Degenerate Transposase; Transposase Tnpa Isl3 Family; Transposase TnpA; TnpA Transposase; Transposase IS; Low Quality Protein; Transposase-Like Protein; Transposase Subfamily; Transposase ISLasa4v; ISL3 Family Transposase; Transposase TnpA ISL3 Family; ISBma1 Transposase
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MNNVILNTFDLKDKNIIFDGKLEKIEYKGRKCFFYYAKLIYTPEVCPNCNCKNINGNLIKNGSKTSRITMPKISEYPTYI MLRKQRFKCKTCERYFTAETPEVDKYCFISKITRSAVLNKAAEIRSEKSIAKSCSVSATTVSRIIDEAAQSLHQSPYSAL PEHIMMDEFKSVKNVSGKMSFIYADAQTHHIIDIVEDRRLSELKKYFYRFSLKARKRVKTVSIDMHEGYMTLIKEMFPNA KIVIDRFHIVQLLNRALNGIRVTVMNELRATNQPLYNRFKRYAKLLLKPEEDLEAFEYHKVALFKERKTQKGIVKYLLDQ DDSLNDAYQYINQLRFKLKHNDYGGFIHELKHMPLSQTHSVVQRAIKTLNKHVYFIKNTFDYYNLSNGPLEGINNKIKLI KRTSFGYGSYNHLRNRILLCSKLYAPKSKKEVKQCLVA
Sequences:
>Translated_438_residues MNNVILNTFDLKDKNIIFDGKLEKIEYKGRKCFFYYAKLIYTPEVCPNCNCKNINGNLIKNGSKTSRITMPKISEYPTYI MLRKQRFKCKTCERYFTAETPEVDKYCFISKITRSAVLNKAAEIRSEKSIAKSCSVSATTVSRIIDEAAQSLHQSPYSAL PEHIMMDEFKSVKNVSGKMSFIYADAQTHHIIDIVEDRRLSELKKYFYRFSLKARKRVKTVSIDMHEGYMTLIKEMFPNA KIVIDRFHIVQLLNRALNGIRVTVMNELRATNQPLYNRFKRYAKLLLKPEEDLEAFEYHKVALFKERKTQKGIVKYLLDQ DDSLNDAYQYINQLRFKLKHNDYGGFIHELKHMPLSQTHSVVQRAIKTLNKHVYFIKNTFDYYNLSNGPLEGINNKIKLI KRTSFGYGSYNHLRNRILLCSKLYAPKSKKEVKQCLVA >Mature_438_residues MNNVILNTFDLKDKNIIFDGKLEKIEYKGRKCFFYYAKLIYTPEVCPNCNCKNINGNLIKNGSKTSRITMPKISEYPTYI MLRKQRFKCKTCERYFTAETPEVDKYCFISKITRSAVLNKAAEIRSEKSIAKSCSVSATTVSRIIDEAAQSLHQSPYSAL PEHIMMDEFKSVKNVSGKMSFIYADAQTHHIIDIVEDRRLSELKKYFYRFSLKARKRVKTVSIDMHEGYMTLIKEMFPNA KIVIDRFHIVQLLNRALNGIRVTVMNELRATNQPLYNRFKRYAKLLLKPEEDLEAFEYHKVALFKERKTQKGIVKYLLDQ DDSLNDAYQYINQLRFKLKHNDYGGFIHELKHMPLSQTHSVVQRAIKTLNKHVYFIKNTFDYYNLSNGPLEGINNKIKLI KRTSFGYGSYNHLRNRILLCSKLYAPKSKKEVKQCLVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51250; Mature: 51250
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVILNTFDLKDKNIIFDGKLEKIEYKGRKCFFYYAKLIYTPEVCPNCNCKNINGNLIK CCCEEEEEEECCCCCEEECCCCCEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCCEEE NGSKTSRITMPKISEYPTYIMLRKQRFKCKTCERYFTAETPEVDKYCFISKITRSAVLNK CCCCCCEEECCCCCCCCCEEEEEHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH AAEIRSEKSIAKSCSVSATTVSRIIDEAAQSLHQSPYSALPEHIMMDEFKSVKNVSGKMS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEE FIYADAQTHHIIDIVEDRRLSELKKYFYRFSLKARKRVKTVSIDMHEGYMTLIKEMFPNA EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHCCCC KIVIDRFHIVQLLNRALNGIRVTVMNELRATNQPLYNRFKRYAKLLLKPEEDLEAFEYHK EEEEHHHHHHHHHHHHHCCEEEEEEHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH VALFKERKTQKGIVKYLLDQDDSLNDAYQYINQLRFKLKHNDYGGFIHELKHMPLSQTHS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH VVQRAIKTLNKHVYFIKNTFDYYNLSNGPLEGINNKIKLIKRTSFGYGSYNHLRNRILLC HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH SKLYAPKSKKEVKQCLVA HHHCCCCCHHHHHHHHCC >Mature Secondary Structure MNNVILNTFDLKDKNIIFDGKLEKIEYKGRKCFFYYAKLIYTPEVCPNCNCKNINGNLIK CCCEEEEEEECCCCCEEECCCCCEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCCEEE NGSKTSRITMPKISEYPTYIMLRKQRFKCKTCERYFTAETPEVDKYCFISKITRSAVLNK CCCCCCEEECCCCCCCCCEEEEEHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH AAEIRSEKSIAKSCSVSATTVSRIIDEAAQSLHQSPYSALPEHIMMDEFKSVKNVSGKMS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEE FIYADAQTHHIIDIVEDRRLSELKKYFYRFSLKARKRVKTVSIDMHEGYMTLIKEMFPNA EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHCCCC KIVIDRFHIVQLLNRALNGIRVTVMNELRATNQPLYNRFKRYAKLLLKPEEDLEAFEYHK EEEEHHHHHHHHHHHHHCCEEEEEEHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH VALFKERKTQKGIVKYLLDQDDSLNDAYQYINQLRFKLKHNDYGGFIHELKHMPLSQTHS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH VVQRAIKTLNKHVYFIKNTFDYYNLSNGPLEGINNKIKLIKRTSFGYGSYNHLRNRILLC HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH SKLYAPKSKKEVKQCLVA HHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA