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The map label for this gene is ybgL [C]

Identifier: 82751205

GI number: 82751205

Start: 1591348

End: 1592100

Strand: Reverse

Name: ybgL [C]

Synonym: SAB1476c

Alternate gene names: 82751205

Gene position: 1592100-1591348 (Counterclockwise)

Preceding gene: 82751206

Following gene: 82751204

Centisome position: 58.05

GC content: 35.06

Gene sequence:

>753_bases
ATGCGAGTTGATTTGAATTGTGATTTAGGAGAAGCATTTGGAAATTATTCCTTTGGTGGTGATCATCAAATTATTCCGTT
AATTACAAGTGCGAATGTTGCTTGTGGTTTTCACGCTGGTGATGAAAATGTAATGAATGAAACGGTAAAACTTGCCAAAG
CACATAATGTTGCAGTAGGTGCACATCCTGGTTTACCTGATTTGAAGGGTTTTGGCAGACGAAATATAGATATCTCTAAC
GAGGAGATTTATAATTTGATGATTTATCAATTAGGTGCATTACAAGGGTTTTGTCGCATTCATCAAGTTAAAATTAATCA
TGTTAAACCGCATGGTGCATTGTATCAGATGGGTGCAAAAGACAGAGAAATAGCAAGTGTTATAGCACAAGCTGTTTATG
ACTTTGATCCATCACTAGTGCTAGTAGGATTAGCAAATTCATATCTAATTTCAGAAGCAAAGAATGTCGGATTAATTACA
GCTTCTGAAGTGTTTGCTGATAGACGATACGAAGATGATGGGCAGCTCGTTAGTAGAAAAGAAAGTGATGCTGTGATTAC
TGATACTGACGAAGCACTTAAGCAGGTTTTGAAGATGGTGAAGGAAAATAAAGTTATTTCAAAAAACAATAAGGAAGTAA
CGTTACAAGCAGATACAATTTGTGTGCATGGTGATGGAGAACATGCATTATTATTTGTTTCGAAAATTAGAGAAATTTTA
ATGAAAGAAGGCATTGATATTCAATCCTTATAG

Upstream 100 bases:

>100_bases
ATGCAGTTTTAAATTATCCACTATATCGTGATGGAGATGCAAAAGATGTTGATATTAAATTTTTAGAAAAACATCAAATT
GTTAAAGGGGTGGAATTATA

Downstream 100 bases:

>100_bases
GGGGCTAAAAAATGGGGAGAAATTTAAAGCTTAAAAAAGAAAGTGACTTTGAATTCACAAAAAATCATAAAAGGTTATTA
TTAGGTTCTGTATTTTTGAT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISN
EEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAKDREIASVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT
ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
MKEGIDIQSL

Sequences:

>Translated_250_residues
MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISN
EEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAKDREIASVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT
ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
MKEGIDIQSL
>Mature_250_residues
MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISN
EEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAKDREIASVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT
ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
MKEGIDIQSL

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=245, Percent_Identity=46.1224489795918, Blast_Score=235, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27436; Mature: 27436

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG
CEEECCCCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCEEEE
AHPGLPDLKGFGRRNIDISNEEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCC
DREIASVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK
HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCEEEHHHHHHCCCCCCCCCEECCC
ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
CCCCEEECCHHHHHHHHHHHHCCCEECCCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHH
MKEGIDIQSL
HHCCCCCCCC
>Mature Secondary Structure
MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG
CEEECCCCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCEEEE
AHPGLPDLKGFGRRNIDISNEEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCC
DREIASVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK
HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCEEEHHHHHHCCCCCCCCCEECCC
ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
CCCCEEECCHHHHHHHHHHHHCCCEECCCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHH
MKEGIDIQSL
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]