| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is ycsG [H]
Identifier: 82751204
GI number: 82751204
Start: 1590107
End: 1591336
Strand: Reverse
Name: ycsG [H]
Synonym: SAB1475c
Alternate gene names: 82751204
Gene position: 1591336-1590107 (Counterclockwise)
Preceding gene: 82751205
Following gene: 82751203
Centisome position: 58.02
GC content: 33.33
Gene sequence:
>1230_bases ATGGGGAGAAATTTAAAGCTTAAAAAAGAAAGTGACTTTGAATTCACAAAAAATCATAAAAGGTTATTATTAGGTTCTGT ATTTTTGATGGCAACTTCTGCAATTGGGCCAGCATTTTTAACGCAAACAGCAGTATTTACATCACAATTTTTTGCAAGTT TCGCATTTGCCATATTACTGTCTATTATCATTGACATTGGTGCACAAATTAATATATGGCGCATATTAGTTGTAACTGGT TTAAGAGGTCAAGAAATATCAAATAAAGTTGTTCCTGGGCTTGGTACTGTTATCTCAATATTGATTGCATTTGGTGGTCT AGCTTTTAATATTGGTAATATTGCTGGTGCCGGTTTAGGTTTAAATGCAATTTTTGGATTAGATGTAAAATGGGGTGCAG CTATTACTGCAATCTTTGCAATATTAATCTTTGTAAGTAAAAGTGGCCAAAAAATTATGGACGTTGTTTCAATGATTCTT GGTATTGTGATGATTTTAGTTGTGGCATATGTGATGTTTGTTTCTAATCCACCTTATGGTGATGCTTTTGTGCATACATT TGCATCAGAACATCCAATGAAATTAGTCTTGCCAATCATTACGTTAGTTGGTGGAACTGTAGGTGGTTATATTACCTTTG CAGGTGCACATCGTATATTAGACTCTGGCATTAAAGGTAAGCAATATTTACCATTTGTAAATCAATCAGCAATTGCAGGT ATTTTAACTACAGGTATTATGAGAACGTTACTATTCCTAGCGGTATTAGGAGTTGTTGTAACAGGTGTGACACTAAGTTC TGAAAATCCACCAGCGTCAGTTTTTGAACACGCAATTGGACCAATTGGAAAGAATATTTTTGGTATTGTGTTATTTGCTG CAGCTATGTCATCAGTAATTGGCTCAGCATACACAAGCGCAACATTTTTAAAAACACTTCATAAATCACTTAACGAAAGA AGTAATTTAATTGTGATTGTGTTTATCGTTATTTCAACAATGATTTTCTTATTTATTGGAAAACCAATCAGCCTTTTAAT TATAGCAGGCGCGATAAATGGATGGATTTTACCTATTACGTTAGGTGCAATTTTGATTGCAAGTAAAAAGAAATCAATCG TCGGTGATTATAAACACCCAAATTGGATGTTCATCTTTGGTATCGTTGCAGTACTTGTTACAATATTGACAGGTATATTC TCATTCAAAGAAGTACTTCAGTTATTTTAA
Upstream 100 bases:
>100_bases TGCATGGTGATGGAGAACATGCATTATTATTTGTTTCGAAAATTAGAGAAATTTTAATGAAAGAAGGCATTGATATTCAA TCCTTATAGGGGGCTAAAAA
Downstream 100 bases:
>100_bases AAGACATTTTGACTAATAGCATCACTTTAAATGTTGTTAGTATTAGGCAAGATGTATTTTGATTCCCGGTGATTCATTTA TAAAGCATAATTAGATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MGRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTAVFTSQFFASFAFAILLSIIIDIGAQINIWRILVVTG LRGQEISNKVVPGLGTVISILIAFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMIL GIVMILVVAYVMFVSNPPYGDAFVHTFASEHPMKLVLPIITLVGGTVGGYITFAGAHRILDSGIKGKQYLPFVNQSAIAG ILTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVFEHAIGPIGKNIFGIVLFAAAMSSVIGSAYTSATFLKTLHKSLNER SNLIVIVFIVISTMIFLFIGKPISLLIIAGAINGWILPITLGAILIASKKKSIVGDYKHPNWMFIFGIVAVLVTILTGIF SFKEVLQLF
Sequences:
>Translated_409_residues MGRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTAVFTSQFFASFAFAILLSIIIDIGAQINIWRILVVTG LRGQEISNKVVPGLGTVISILIAFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMIL GIVMILVVAYVMFVSNPPYGDAFVHTFASEHPMKLVLPIITLVGGTVGGYITFAGAHRILDSGIKGKQYLPFVNQSAIAG ILTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVFEHAIGPIGKNIFGIVLFAAAMSSVIGSAYTSATFLKTLHKSLNER SNLIVIVFIVISTMIFLFIGKPISLLIIAGAINGWILPITLGAILIASKKKSIVGDYKHPNWMFIFGIVAVLVTILTGIF SFKEVLQLF >Mature_408_residues GRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTAVFTSQFFASFAFAILLSIIIDIGAQINIWRILVVTGL RGQEISNKVVPGLGTVISILIAFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMILG IVMILVVAYVMFVSNPPYGDAFVHTFASEHPMKLVLPIITLVGGTVGGYITFAGAHRILDSGIKGKQYLPFVNQSAIAGI LTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVFEHAIGPIGKNIFGIVLFAAAMSSVIGSAYTSATFLKTLHKSLNERS NLIVIVFIVISTMIFLFIGKPISLLIIAGAINGWILPITLGAILIASKKKSIVGDYKHPNWMFIFGIVAVLVTILTGIFS FKEVLQLF
Specific function: Unknown
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 43609; Mature: 43478
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTAVFTSQFFASFAFAILL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SIIIDIGAQINIWRILVVTGLRGQEISNKVVPGLGTVISILIAFGGLAFNIGNIAGAGLG HHHHHCCCCCEEEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHCCHHEECCCHHCCCCC LNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMILGIVMILVVAYVMFVSNPPYG CHHHEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAFVHTFASEHPMKLVLPIITLVGGTVGGYITFAGAHRILDSGIKGKQYLPFVNQSAIAG HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH ILTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVFEHAIGPIGKNIFGIVLFAAAMSSVI HHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GSAYTSATFLKTLHKSLNERSNLIVIVFIVISTMIFLFIGKPISLLIIAGAINGWILPIT HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHEEHHHHCCCHHHHH LGAILIASKKKSIVGDYKHPNWMFIFGIVAVLVTILTGIFSFKEVLQLF HHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTAVFTSQFFASFAFAILL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SIIIDIGAQINIWRILVVTGLRGQEISNKVVPGLGTVISILIAFGGLAFNIGNIAGAGLG HHHHHCCCCCEEEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHCCHHEECCCHHCCCCC LNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMILGIVMILVVAYVMFVSNPPYG CHHHEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAFVHTFASEHPMKLVLPIITLVGGTVGGYITFAGAHRILDSGIKGKQYLPFVNQSAIAG HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH ILTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVFEHAIGPIGKNIFGIVLFAAAMSSVI HHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GSAYTSATFLKTLHKSLNERSNLIVIVFIVISTMIFLFIGKPISLLIIAGAINGWILPIT HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHEEHHHHCCCHHHHH LGAILIASKKKSIVGDYKHPNWMFIFGIVAVLVTILTGIFSFKEVLQLF HHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 8969502 [H]