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The map label for this gene is smf

Identifier: 82750850

GI number: 82750850

Start: 1201167

End: 1202039

Strand: Direct

Name: smf

Synonym: SAB1111

Alternate gene names: 82750850

Gene position: 1201167-1202039 (Clockwise)

Preceding gene: 82750849

Following gene: 82750851

Centisome position: 43.8

GC content: 31.5

Gene sequence:

>873_bases
ATGTTAAATCACATTTTACTTAAATTAATTTGGAGTCGTTTTACTACTGCACAAATACATCTACTTTTAAAAACTTTTCC
AAGTTGTTGTGAAGTAGACGAATATGAACGAATGCATATTCTAGAAAATTTTTGTAAGCTTTTAGCGGATAAAAAAATAG
ATGCTAAAGTTAACCGTTACAAGGAAATTTCTGTTGATGAAATTGAAACAACAATTCAGAAAACCCAATTAAATTATATA
ACTTGTTTTGATCATAATTATCCCTATTTATTAAAAGAAACTTACAATTATCCTATCATTTTGTTCTATAAAAGGAATAT
TAACCACCTTAGTTATTCGCACACTTTAGCTGTCGTTGGGTCACCATTATCAGGCGACTATACTTTAAAGGCATTGAATC
ATCTCTTCGCTTCATTTCAACAAATGAGTTTCTGTGTTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGAGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Upstream 100 bases:

>100_bases
CTCCTTAAATTCTGGTAACAAATAGAGCCCCTTTGTTAACGAAATGAAAAATCAAATGTGTAGATAGTAGTTTATAATTT
ATGACAAAGGAGTAATAAAT

Downstream 100 bases:

>100_bases
AACTAAAAATAACGAGTTGCTTCATATTTCTTTTGTTACCCTTTGTAATTTATTTTTTAATAAAATCTATAAAAAATAGA
CAAGGAAAATGATTTGTTTA

Product: DNA processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLNHILLKLIWSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVNRYKEISVDEIETTIQKTQLNYI
TCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAVVGSPLSGDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Sequences:

>Translated_290_residues
MLNHILLKLIWSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVNRYKEISVDEIETTIQKTQLNYI
TCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAVVGSPLSGDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI
>Mature_290_residues
MLNHILLKLIWSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVNRYKEISVDEIETTIQKTQLNYI
TCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAVVGSPLSGDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=202, Percent_Identity=40.5940594059406, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 33239; Mature: 33239

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHILLKLIWSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVNRY
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
KEISVDEIETTIQKTQLNYITCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAVVG
HCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEE
SPLSGDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQTH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCCC
YPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
CCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEE
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI
EEEEEEECCCEEEEECCHHCCCCCCCCEEEEECCCEEEEECHHHHHHCCC
>Mature Secondary Structure
MLNHILLKLIWSRFTTAQIHLLLKTFPSCCEVDEYERMHILENFCKLLADKKIDAKVNRY
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
KEISVDEIETTIQKTQLNYITCFDHNYPYLLKETYNYPIILFYKRNINHLSYSHTLAVVG
HCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEE
SPLSGDYTLKALNHLFASFQQMSFCVVSGLAQGADAMAHQIALKYNLPTIAVLAFGHQTH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCCC
YPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
CCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEE
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI
EEEEEEECCCEEEEECCHHCCCCCCCCEEEEECCCEEEEECHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]