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The map label for this gene is ywbD [H]

Identifier: 82750691

GI number: 82750691

Start: 1027740

End: 1028912

Strand: Direct

Name: ywbD [H]

Synonym: SAB0947

Alternate gene names: 82750691

Gene position: 1027740-1028912 (Clockwise)

Preceding gene: 82750689

Following gene: 82750692

Centisome position: 37.47

GC content: 31.46

Gene sequence:

>1173_bases
ATGAAAATAGCAACTCTGAACAAAGGCAAAGAAACAAAATATTTTAATGGATATCCTTTAATTGAAGAAGAGGATATCTA
TTCACAAGATCATTTAAAAGAAGGAGATGTTTTTCAAATTGTGACTGATAAATCACAATATGTTGCAACGGCTTATGTTG
GTCGCCAACATAAAGGATTAGGTTGGGTTCTAACATACGATGAAGCTCAAGAAATCAATACAGCTTTCTTTGTGAAATTG
TTTAAAACTGCATTAGCAGAACGTGATTATTATTTTAATATAGATGGAACAAATGCTTTTAGATTATTTAATGCTGAAGG
TGATGGTGTTGGGGGATTAACGATCGACAATTACGATGGTCATTTGTTGATTCAATGGTACTCAAAAGGTATTTATAAAT
TTAAATATGCCATTCTTGAAGCGGTTAGAAAAGTATTTGATTATAAATCTATTTACGAAAAAGTAAGATTTAAAGACAGC
GAATATAGTGGTGGTTTTGTTGAAGGCGATGCACCTGAGTTTCCAATTGTTATCGAAGAAAACTTCACATTTTATAACGT
AGACCTTGAAGATGGTTTGATGACAGGTATCTTTTTAGATCAAAAAGAAGTGCGCAAGAAATTAAGGGGTCAATATGCCA
AAGAACGCCATGTTTTAAACTTATTTAGTTATACAGGTGCTTTTTCTGTAATAGCAGCAAGTGAGGCATCTTCAACAACA
AGTGTAGATTTGGCTAATCGTTCTCGTAGTTTAACTGAAGAAAATTTTGGATTAAATGCTATTGATCCTAAATCTCAATA
TATTTATGTCATGGACACTTTTGATTTCTATAAATATGCTGCACGTCATGGACATAGTTATGACACGATCGTGATTGATC
CACCTAGCTTTGCACGCAACAAAAAACGTACATTTTCAGTGCAAAAAGATTATGACAAATTAATTAATGGCGCCTTAAAT
ATCTTATCATCTGAAGGAACATTATTATTATGTACAAACGCAAGTGTATATCCATTAAAGCAATTTAAAAATACTATTAA
AAAGACACTTGAAGAGAGTGGTGTTGATTATGAATTAACTGAAGTTATGGGATTACCAAAAGATTTTAAAACGCATCCAC
ATTATAAGCCATCTAAATATTTAAAAGCTGTTTTTGTAAATATTAGACATTAA

Upstream 100 bases:

>100_bases
GTTAAAATCAACAGTAAGATTAGAAGTAGATGATATTGAAATTTGGCAAACAATTTAATCTATATAAAACTACAACAAAA
CACAGAAAGGAAGTTGTCAG

Downstream 100 bases:

>100_bases
TTTGATAAAAAGGGGTATAGTAACTTATTGAGAAAAAGAAGGGTGATAATATTATGGGATTCAAAAATAATTTAACGTCA
AATTTAACTAATAAAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDVFQIVTDKSQYVATAYVGRQHKGLGWVLTYDEAQEINTAFFVKL
FKTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALN
ILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH

Sequences:

>Translated_390_residues
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDVFQIVTDKSQYVATAYVGRQHKGLGWVLTYDEAQEINTAFFVKL
FKTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALN
ILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
>Mature_390_residues
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDVFQIVTDKSQYVATAYVGRQHKGLGWVLTYDEAQEINTAFFVKL
FKTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALN
ILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=391, Percent_Identity=27.6214833759591, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787181, Length=251, Percent_Identity=29.0836653386454, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 44740; Mature: 44740

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDVFQIVTDKSQYVATAYVGRQHKGL
CEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
GWVLTYDEAQEINTAFFVKLFKTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDG
EEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEECCCC
HLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEE
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEC
NFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
CEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARN
EEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEECCCHHHCC
KKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELT
CCCEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHH
EVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
HHHCCCHHHCCCCCCCHHHHHEEHEEEECC
>Mature Secondary Structure
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDVFQIVTDKSQYVATAYVGRQHKGL
CEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
GWVLTYDEAQEINTAFFVKLFKTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDG
EEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEECCCC
HLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEE
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEC
NFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
CEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARN
EEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEECCCHHHCC
KKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELT
CCCEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHH
EVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
HHHCCCHHHCCCCCCCHHHHHEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]