| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
Click here to switch to the map view.
The map label for this gene is 82749938
Identifier: 82749938
GI number: 82749938
Start: 209129
End: 211012
Strand: Direct
Name: 82749938
Synonym: SAB0169
Alternate gene names: NA
Gene position: 209129-211012 (Clockwise)
Preceding gene: 82749936
Following gene: 82749943
Centisome position: 7.63
GC content: 35.4
Gene sequence:
>1884_bases ATGAAAAAGCAAATAATTTCGCTAGGCGCATTAGCAGTTGCATCTAGCTTATTTACATGGGATAACAAAGCAGATGCGAT AGTAACAAAGGATTATAGCGGGAAATCACAAGTTAATGCTGGGAGTAAAAATGGGACACCGATTTCTAATGGTTACTTTT GGGGGAAAATCGATAGTCTAGAATCACAATTTTCTAAAGCATTAGCAATAATTGAAGAGTATCAATATGGTGAGAAAGAA TATAAAGATGCAAAAGATAAGTTTATGGATAGAATTTTGTCAGAAGATCAATATCTTTTGGAGAAAAAGAAAGCTCTGTA TGAGAAATATAAAGAGTGGTATAAAAAGCACAAAGAGATAAACCCAACTTATCCAAAAATGCAAACATTCCATGAATTTA GTGTATATAATCTAACTATGGAAGAATACAATGAGATTTCTAAATCTTTGAAAGATGCGGAAGAAGAGTTTCGTAAAAAT GTAAGCGAAGTTCAAGAGAAAGAAGTCAAATTAAAAACATATAGCGAAGATGAAGAAGAAAAGGCAACTAAAGAAGTATA CGATCTTGTAGCCGAAGTTGATACTATATATGTATCTTATTTTGGACATGATAAACATGGTCAAAGTGCTAAAGAATTGC GTGCGAAATTAGATTTAATAATTGGAGAGGAAAAAAACGCCTTTCGTATTACTAATGAACGTATAAAAAATGAAATGATT TATGACTTGAATTCTATTATTGACGATTTCTTTATGGAAACTAACCAAAATAGACCGGAAAATATAACAAAATTTGATTG GGATAAGCATGATTATAGAAATAAACTAGAAAACAAAGCACATTTTGAGGCTCTAGTTGAAGAAACGAAAAAAGCAGTTA AAGAAGCAGATGCATCTTGGAAAAAGAAAACTGTCAAAAATTACGATGAATCTGTAACAAAAGCACATGTTGTAAAAGAA GAGAAGAAAGTTGAAGAACCTCAATCACCTAAAGTTGATAACCAACAAGATGACAAAGCAACACAACCAGTGGCACAGCC ATTAGTAAAAATTCCACAAGGGACAATCTATGGTGAAACTGTAAAAGGTCCGGAATATCCAACGATGGAAAATAAAACGT TACAAGGTGAAATCGTTCAAGGTCCTGATTTCCCAACAATGGAACAAAACAGACCATCATTAAGCGATAATTATACTCAA CCATCGTTAACGAACCCTATTTTAGAAGGTCTTGAAGGTAGCTCATCTAAACTTGAAATAAAACCACAAGGTACTGAATC AACGTTGAAAGGTATTCAAGGAGAATCAAGTGATATTGAAGTTAAACCTCAAGCAACTGAAACAACAGAAGCTTCTCAAT ATGGTCCGAGACCGCAATTTAACAAAACACCTAAGTATGTGAAATATAGAGATGCTGGTACAGGTATCCGTGAATACAAC GATGGAACATTTGGATATGAAGCGAGACCAAGATTCAATAAGCCATCAGAAACAAATGCATACAACGTAACGACAAATCA AGATGGCACAGTATCATATGGCGCTCGCCCGACACAAAACAAGCCAAGCAAAACAAACGCATATAACGTAACAACACATG CAAACGGCCAAGTATCATACGGTGCTCGCCCGACACAAAACAAGCCAAGCAAAACAAACGAGTATAACGTAACAACACAT GCAAATGGCCAAGTATCATATGGTGCTCGTCCGACATACAAGAAGCCAAGTGAAACGAACGCATATAACGTAACAACACA TGCAAACGGTCAAGTATCATACGGCGCTCGCCCTACACAAAACAAGCCAAGTAAAACAAATGCATACAATGTAACAACAC ATGCAGATGGTACTGCGACATATGGCTCTAGAGTAACAAAATAA
Upstream 100 bases:
>100_bases AATGCTTTGTTTATTCTAGTTAATATATAGTTAATGTCTTTTAATATTTTGTTTCTTTAATGTAGATTGGGCAATTACAT TTTGGAGGAATTAAAAAATT
Downstream 100 bases:
>100_bases GTTTATAACTCTATCCATAGACATACAGTCAATACAAAACATTACGTATCTTTACAACAGTAATCATGCATTCTATGATG CTTCTAACTGAATTAAAGCA
Product: staphylocoagulase precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTPISNGYFWGKIDSLESQFSKALAIIEEYQYGEKE YKDAKDKFMDRILSEDQYLLEKKKALYEKYKEWYKKHKEINPTYPKMQTFHEFSVYNLTMEEYNEISKSLKDAEEEFRKN VSEVQEKEVKLKTYSEDEEEKATKEVYDLVAEVDTIYVSYFGHDKHGQSAKELRAKLDLIIGEEKNAFRITNERIKNEMI YDLNSIIDDFFMETNQNRPENITKFDWDKHDYRNKLENKAHFEALVEETKKAVKEADASWKKKTVKNYDESVTKAHVVKE EKKVEEPQSPKVDNQQDDKATQPVAQPLVKIPQGTIYGETVKGPEYPTMENKTLQGEIVQGPDFPTMEQNRPSLSDNYTQ PSLTNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYN DGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTQNKPSKTNEYNVTTH ANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHADGTATYGSRVTK
Sequences:
>Translated_627_residues MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTPISNGYFWGKIDSLESQFSKALAIIEEYQYGEKE YKDAKDKFMDRILSEDQYLLEKKKALYEKYKEWYKKHKEINPTYPKMQTFHEFSVYNLTMEEYNEISKSLKDAEEEFRKN VSEVQEKEVKLKTYSEDEEEKATKEVYDLVAEVDTIYVSYFGHDKHGQSAKELRAKLDLIIGEEKNAFRITNERIKNEMI YDLNSIIDDFFMETNQNRPENITKFDWDKHDYRNKLENKAHFEALVEETKKAVKEADASWKKKTVKNYDESVTKAHVVKE EKKVEEPQSPKVDNQQDDKATQPVAQPLVKIPQGTIYGETVKGPEYPTMENKTLQGEIVQGPDFPTMEQNRPSLSDNYTQ PSLTNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYN DGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTQNKPSKTNEYNVTTH ANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHADGTATYGSRVTK >Mature_627_residues MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTPISNGYFWGKIDSLESQFSKALAIIEEYQYGEKE YKDAKDKFMDRILSEDQYLLEKKKALYEKYKEWYKKHKEINPTYPKMQTFHEFSVYNLTMEEYNEISKSLKDAEEEFRKN VSEVQEKEVKLKTYSEDEEEKATKEVYDLVAEVDTIYVSYFGHDKHGQSAKELRAKLDLIIGEEKNAFRITNERIKNEMI YDLNSIIDDFFMETNQNRPENITKFDWDKHDYRNKLENKAHFEALVEETKKAVKEADASWKKKTVKNYDESVTKAHVVKE EKKVEEPQSPKVDNQQDDKATQPVAQPLVKIPQGTIYGETVKGPEYPTMENKTLQGEIVQGPDFPTMEQNRPSLSDNYTQ PSLTNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYN DGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTQNKPSKTNEYNVTTH ANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHADGTATYGSRVTK
Specific function: Staphylocoagulase is an extracellular protein which specifically forms a complex with human prothrombin. This complex named staphylothrombin can clot fibrinogen without any proteolytic cleavage of prothrombin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the staphylocoagulase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014874 - InterPro: IPR001443 [H]
Pfam domain/function: PF08764 Coagulase; PF04022 Staphylcoagulse [H]
EC number: NA
Molecular weight: Translated: 71178; Mature: 71178
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00429 STAPHYLOCOAGULASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTPISNGYFWGKIDSL CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHH ESQFSKALAIIEEYQYGEKEYKDAKDKFMDRILSEDQYLLEKKKALYEKYKEWYKKHKEI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC NPTYPKMQTFHEFSVYNLTMEEYNEISKSLKDAEEEFRKNVSEVQEKEVKLKTYSEDEEE CCCCCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH KATKEVYDLVAEVDTIYVSYFGHDKHGQSAKELRAKLDLIIGEEKNAFRITNERIKNEMI HHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHH YDLNSIIDDFFMETNQNRPENITKFDWDKHDYRNKLENKAHFEALVEETKKAVKEADASW HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKTVKNYDESVTKAHVVKEEKKVEEPQSPKVDNQQDDKATQPVAQPLVKIPQGTIYGET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCC VKGPEYPTMENKTLQGEIVQGPDFPTMEQNRPSLSDNYTQPSLTNPILEGLEGSSSKLEI CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEE KPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYN ECCCCHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCC DGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKPSKTNAYNVTTHANGQVSY CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCEEEEECCCCEEEC GARPTQNKPSKTNEYNVTTHANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQ CCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCC NKPSKTNAYNVTTHADGTATYGSRVTK CCCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTPISNGYFWGKIDSL CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHH ESQFSKALAIIEEYQYGEKEYKDAKDKFMDRILSEDQYLLEKKKALYEKYKEWYKKHKEI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC NPTYPKMQTFHEFSVYNLTMEEYNEISKSLKDAEEEFRKNVSEVQEKEVKLKTYSEDEEE CCCCCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH KATKEVYDLVAEVDTIYVSYFGHDKHGQSAKELRAKLDLIIGEEKNAFRITNERIKNEMI HHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHH YDLNSIIDDFFMETNQNRPENITKFDWDKHDYRNKLENKAHFEALVEETKKAVKEADASW HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKTVKNYDESVTKAHVVKEEKKVEEPQSPKVDNQQDDKATQPVAQPLVKIPQGTIYGET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCC VKGPEYPTMENKTLQGEIVQGPDFPTMEQNRPSLSDNYTQPSLTNPILEGLEGSSSKLEI CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEE KPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYN ECCCCHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCC DGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKPSKTNAYNVTTHANGQVSY CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCEEEEECCCCEEEC GARPTQNKPSKTNEYNVTTHANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQ CCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCC NKPSKTNAYNVTTHADGTATYGSRVTK CCCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2587230; 3941089 [H]